| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0568 |
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| Symbol | |
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| ID | 8224137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 643967 |
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| End bp | 645628 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928444 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003084998 |
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| Protein GI | 255034377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0964666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.604782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA TGAAGAGAAT CTTTACCTAC ATCCTACTGA CCTCCCTCGC CGTCGCATGT
CAGGTGGACA TGCCCCAAAA GCCTGTTTCG CGCTTCAAAT TCACGCCCGA AAACGGCTGC
AAGGCCCCAT GCAGCGTCAC ATTCACCAGC GAAGCAGAAA ACGCGGCAAA TATTCAATGG
GATTTCGGGG ATGGGACGCC TTTGCAGAGT GGTGATTCCA TCCCGCATGA TTTTGAGACG
GCAGGTAATT ATCAGGTAAA ACTGATTGTG AAAGGAATTG ATGGCGGCAG CAATGGCTCC
ACCAGGACTG TACAGATCGG AGCTCCTTCC CCGGAAGCAT TCAGCATCTC AGGCGGATAC
AATTTCCCGA CAGACATCAT AGCCGACTCC AAAGGCAACA TTTACGTTTC CGGCACAGCC
AAAGGCGTGG TTCGGTTCGG CAATAAAAAA ACCCTGAATT CGGTCGCGGG TTCGGACGAT
TTCTTCGTCG CCAAATACAA CAGCGCAGGA CAATGCGTGT GGCTTTACAC CGATGGCAGC
ACCGGTGACG ATCATGCGAA TGCCATCGCT CTGGACAGCG CCGGGCATGT ATATGTAACA
GGTTTCATCA GCGGCCCACT TACCCGGCAA TCGGTCACGG CAAAAGGCGG CCTAGACGGA
TTTGTCGCGA AGATCAAGCC GGACGGAACT ACCGATTGGT TTAAAACTTT TGGTGGACCA
CAAAACGACC AGGGAAGGGC ACTTGCATTT TTTGAGGCAG CCGAAAGACC TAAAATATAC
CTGACAGGAA CCGTTGAAGG TGATAATATC AACACCAATA TCGCTTTTCC CGGAACCATG
CCACAGAAAG CGGATGGTCG GGATGGCTTT TTGACAATAC TTTCTGCCCT CGACGGTAAT
TTTGGGTCTG CCCACATGAT GCAGGGAGCC GACATCCAGG CACCCGAAAC GATTACAGTC
GACGTTTACG GGAATGCCTA CATTGGTGGT GCATTTCTGC AATCTATCAA ATTTTCCAAT
GCGCTTAGCC TGAAAAGCGT TGACAGCGTA GATGCGTTTA TCGCGAAATG GGGGCTTATT
TCTGGAAGTT TCCTCTGGGC AAAACGCATT GGCTCCCGTG AAGTAGATTT CGCCTACGAC
ATTGAAATTG ATAAAACCTA CCAAAACGTT TATCTAACGG GCATGCACAG CGGCGACATT
GAGGACATGA ACCTGCTCAG CGCCGGGGAC GAGAATGTGT ACCTGGGAAA ATGGAGCACT
TCTGACGGTA GGTTCCTCAA CGCACGTAAT GGCTTTAACT CCGGCGGAAA GGATTATCAC
GGGGGTATTG CCAAAACTGC AAATGGTAAC ATTGTCATTT CGGGATCTTT CACGGGCGCT
ACCGGCAGAT TTCCGATGGG TGACAATTTG CTTGTTAATA GTGCAGGAGC GGCCGATATT
ATTCTCACCG AGGTCGATCC CGTTCTACTC AACCGCATTG ATGGTAAAAA ACCTGTCCGC
GACGGAGGAC CTACCGAGGA CAGGGTCAAC AAAATTTGTA TTACCAACAC AGGTTATGTG
TATGTTGCGG GCTGGTTTTA TGACAATTCA ACATTTAATG AGATTACTCT AAACGGCAAG
CATCAAGAGC GAAACACCTT CATCGCCCGC TACAAGCTAT AA
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| Protein sequence | MHFMKRIFTY ILLTSLAVAC QVDMPQKPVS RFKFTPENGC KAPCSVTFTS EAENAANIQW
DFGDGTPLQS GDSIPHDFET AGNYQVKLIV KGIDGGSNGS TRTVQIGAPS PEAFSISGGY
NFPTDIIADS KGNIYVSGTA KGVVRFGNKK TLNSVAGSDD FFVAKYNSAG QCVWLYTDGS
TGDDHANAIA LDSAGHVYVT GFISGPLTRQ SVTAKGGLDG FVAKIKPDGT TDWFKTFGGP
QNDQGRALAF FEAAERPKIY LTGTVEGDNI NTNIAFPGTM PQKADGRDGF LTILSALDGN
FGSAHMMQGA DIQAPETITV DVYGNAYIGG AFLQSIKFSN ALSLKSVDSV DAFIAKWGLI
SGSFLWAKRI GSREVDFAYD IEIDKTYQNV YLTGMHSGDI EDMNLLSAGD ENVYLGKWST
SDGRFLNARN GFNSGGKDYH GGIAKTANGN IVISGSFTGA TGRFPMGDNL LVNSAGAADI
ILTEVDPVLL NRIDGKKPVR DGGPTEDRVN KICITNTGYV YVAGWFYDNS TFNEITLNGK
HQERNTFIAR YKL
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