| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0555 |
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| Symbol | |
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| ID | 8224123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 621842 |
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| End bp | 622480 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928430 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_003084985 |
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| Protein GI | 255034364 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.410968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCATA ATATTGCAAA TATTCGTCAC GACTATCAAC TAAAAGGCTT ACACGAATCG
GATCTCGACC CTGATCCGCT GAAACAGTTC AGGTTATGGT TTGACGAGGT GCTCAAATCG
GGCATTTCGG AATCGAATGC GATGCTGCTC AGCACGGTTT CGGAAGGCCG ACCGTCGGCC
CGTGTTGTGC TCCTGAAAGA CCTCGATGAG CGGGGCTTTT CATTTTTCAC CAACTACGAA
GGCAGGAAGG GCCGCGAAAT AGAGGCCAAT CCGCAGGTAG CGATTACATT TTTCTGGAAA
GAGCTTGAAA GACAGGTCCG TATCGAAGGA AAGATCGAAA AGACCCCGGC GACTGAATCG
GACGAGTATT TCGCCGTGCG CCCGCGCGGG AGCCAGATCG GCGCCTGGGC TTCGGCACAA
AGCGAAGTGA TTCCCGACAG GGAATTTCTG GAAGCAAAAA CAAAGGAATT GGAAGCCCGT
TTCGAAGGCC AGCCCGTACC GCGGCCCGCA CATTGGGGAG GTTACCGCGT CGTACCCGAT
TACATCGAAT TCTGGCAAGG ACGCCCCAGC CGCCTGCACG ACCGGTTAGC TTATACGAAG
GCGGAAGATG GCTGGAAGAT TGAGCGGCTG GCGCCGTAG
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| Protein sequence | MDHNIANIRH DYQLKGLHES DLDPDPLKQF RLWFDEVLKS GISESNAMLL STVSEGRPSA
RVVLLKDLDE RGFSFFTNYE GRKGREIEAN PQVAITFFWK ELERQVRIEG KIEKTPATES
DEYFAVRPRG SQIGAWASAQ SEVIPDREFL EAKTKELEAR FEGQPVPRPA HWGGYRVVPD
YIEFWQGRPS RLHDRLAYTK AEDGWKIERL AP
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