Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0549 |
Symbol | |
ID | 8224117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 616092 |
End bp | 616961 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644928424 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003084979 |
Protein GI | 255034358 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase |
TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.587181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGC AAGCTTATAA CTACGACAAA ATCGCCAAAG CCATCGAATA CATCGTGGCG AATGCGAAAG AACAGCCCAC GCTCACCGAG GTGGCCGACG AAGTCAGCAT CAGCCAATTC CATTTCCAGC GCCTGTTTTC CGAATGGGCC GGTGTAAGTC CCAAGAAGTT TCTGCAATAC ATCACGGCCG GTTATCTTAA AGACCGCATT CGCGAGTCGA CCAGCCTTGC CGAACTGGCG GAATCGGCCG GGTTATCAAG CCAGAGCCGG GTGTACGACC ATTTCATTTC CATCGAGGGC GTGACGCCGC AGGAATATAA GACCGCCGGT AAGGGGCTGG TAATCAGTTA TGGTTTTCAT GAAACTCCGT TTGGTGATTG CTTCATCGCC GCCACTGAAC GGGGCATTTG CGCAATGGCC TTTGTGGACG AAGCCACCCG CGATATGCAG TTGATCGAAC TGGCAAGAAA GTGGCATTAT GCGACCATTC GCCCTGATCA ACAGCTCACG GCCGGCTATA TCGGGCGCAT TTTTAAGCCA GCCGGCCAGT CGCTCGAAAA GCTGCCGTTG CTTGTGCAGG GCACCAATTT TCAGCTCAAA GTGTGGGAAG CATTGCTAAG CATTCCACAA GGCGCCGTGA CCACCTATCA GCAGATCGCC GAGCGGATCG GGCATCCGAA AGCAGTACGG GCCGTGGGCT CGGCCGTGGG CGATAATCCG GTCGCTTACA TTATTCCATG TCACCGGGTG ATCCGTAAAG AAGGCGTTTT GGGCGAATAC CGCTGGGGCA GCCTGCGCAA AAAAGCATTG ATCGGTTGGG AGGCAGCCCG TCAGGATGAG GAATATTTTG CACAGAAACA ACCGCTTTGA
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Protein sequence | MNQQAYNYDK IAKAIEYIVA NAKEQPTLTE VADEVSISQF HFQRLFSEWA GVSPKKFLQY ITAGYLKDRI RESTSLAELA ESAGLSSQSR VYDHFISIEG VTPQEYKTAG KGLVISYGFH ETPFGDCFIA ATERGICAMA FVDEATRDMQ LIELARKWHY ATIRPDQQLT AGYIGRIFKP AGQSLEKLPL LVQGTNFQLK VWEALLSIPQ GAVTTYQQIA ERIGHPKAVR AVGSAVGDNP VAYIIPCHRV IRKEGVLGEY RWGSLRKKAL IGWEAARQDE EYFAQKQPL
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