| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0427 |
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| Symbol | |
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| ID | 8223993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 486514 |
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| End bp | 490164 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644928304 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003084861 |
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| Protein GI | 255034240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTT CCCATTTGCA CTGTCACACG CAGTTCTCGC TGCTCGATGG TGCTGCCGAT
ATCAAAAAGC TGTTCAAAAA GGCCAAGGAG GACAATATGC CCGCCGTCGC CATCACCGAC
CATGGCAATA TGTTCGGGGT GTTCGAGTTT GTGGCCGAGG GGAACAAGCA GGGCATTAAG
CCGATCGTCG GTTGCGAGTT TTATGTAGTG GAAGACCGGC ACGTGCGGCA GTTTACCAAG
GACAAAAAGG ATGTTAGGCA CCATCAGCTG CTGCTGGCGA AGGATGAGAT CGGGTACAAA
AACCTGGTGA AAATGTGCTC GCTGGGCTTT ATCGAGGGAA TGTATGGAAA GTACCCTCGG
ATCGATAAGG ATCTGATCGT GCAATACCAC AAGGGGCTTA TTGCCACGAC TTGCTGTATC
GGTGCCATTA TTCCGAAGAC GATCATCCGC CAGGGCGAGG AGGCTGCCGA ACGCGAATTC
AAATGGTGGC TGGATTTGTT CGGCGATGAT TTTTATGTGG AATTGCAGCG GCACGACATT
CGCGATCAGT ACATTGTGAA TGAGGTGCTT ATCAAGTTTG CACGCAAGTA TAATGTGAAG
ATCATCTGCT CGAACGACTC GCATTATGTC GATCGCGACG ATTGGAATGC GCATGATATC
TTGCTCTGTA TCAACACCGG CGACAAGCAG AGCACGCCAT CGGCCAAGGA TTTTGACGAT
GAGAAGGGTA TTCCAAAAGG CTCGCGCTTC GCATTCTATA ACGACCAGTT TTATTTCAAA
AAAACCAGCG AAATGCTGCA ACTGTTCAAC GACCTGCCCG AGTCGCTGGA CAATACCAAC
GAGATCGTAG ACAAAATCAA AACGCTCGAT CTACGCAAAG ACATTCTGCT CCCCAACTTC
CCGATTCCCG ACGAGTTCAA GACGCATACA TTGTCGGAAA TGGTAGGGAA AAAGGAGCTC
ACCGCCGACG TTTTGAACCA ATGGGAATAC CTGAGGCACC TTACGTTCGA GGGAGCGCGG
AAAAAATACG ACGTGGTAAC GCCGGAAATC GAAGAGCGGC TCAACTTTGA GCTGCAAACG
ATCCGTAACA TGGGTTTTCC CGGCTACTTC CTTATTGTGG CCGATTTTAT TGATGCTGGC
CGCAAAATGG GCGTTTTCAT CGGTCCGGGC CGTGGTTCGG CCGCGGGCTC GGCAGTGGCT
TACGCGATCG GGATCACCAA CATCGACCCC GTCAAGTACG ATCTCCTTTT TGAGCGTTTC
CTCAATCCCG ACCGTATCTC CATGCCCGAT ATCGATACCG ACTTCGACGA CGATGGGCGT
CAGAAGGTGA TTGATTATGT GGTGAAAAAA TACGGCTACA ACCAGGTGGC GCAGATCGTG
ACTTACGGTA CCATGGCCGC CAAATCGGCG ATCAAGGACG TGGCGCGCGT TATGGACCTG
CCATTGCCGG ACGCCAACAT GCTCGCCAAG CTGGTTCCCG ACAAGCCGAC GTACAACATG
ACGCTCAACC GCATTTTCAC AGCGCCGTTG GAAGGCGAGG GCAGTCTTAT GAAAAAAGAA
GGCATTTCGC CCGACGAGTT GGAAAACGTG AAGCGGATGC GTGCCATTGC TGTGGGTAAT
GATTTGCAAG CCAGTGTTTT ACAGGAAGCA AGGAGGTTGG AAGGAACCGT GCGCAACACC
GGTATCCACG CCGCAGGTAT CATCATCGCA CCGAGCGATT TGACGGAAAT TATCCCGGTA
AGTACCTCCA AGGACTCCGA TTTTCTGATC ACCCAATATC AGGGGAAAAT TATCGAGGAT
GCAGGCGTAA TCAAGATGGA CTTCTTGGGC CTTCGAAACC TTTCGATCAT TAAGGAGGCC
CTCAGGATGA TTAAGAACAA CTACGGGCAT GACATTGTGA TTGACGACGT GCCGCTCGAC
GACCCGAAGG TTTTCGAACT TTTCCAGCGC GGCGAGACGA ACGCGATCTT CCAGTTCGAA
TCCGACGGGA TGAAGAAGTA CATGCGCGAC CTCATCCCCG ACCGTTTTGA GCACCTCATC
GCGATGAACG CATTGTACCG TCCCGGTCCG ATTGCCTACA TTCCGAACTT CATCCGCCGG
AAAAACGGGC AGGAGGAGGT AACCTACGAT TTGCCTGAAC TGGAAGAGTA TCTGGCTGAT
ACTTATGGTA TTACAGTGTA CCAGGAGCAG GTGATGCTTT TGTCGCAGAA ACTGGCAGGT
TTCACCAAAG GCCAGGCGGA TACACTGCGG AAGGCGATGG GTAAAAAGCA GATCGAGACG
CTGAACAAGC TCAAAGGCGA CTTCATGAAA GGCGGTACCG AAAAGGGCCT CGACGCAAAG
AAGCTGGAAA AAATATGGAC CGACTGGGAA GCATTTGCGT CATACGCATT CAACAAATCC
CACTCGACAT GCTACGCATT TGTTGCTTAT CAAACGGCTT ACCTGAAAGC GCATTACCCG
GCAGAATATA TGGCGGCGGT ATTGACCAGT TCGCTGGGCA GTATCGATAA GATCACGTTC
TTCATGGAGG AATGTAAAAA CCTCAGTTTG CCGGTTCTGG GGCCGGATAT CAATGAATCG
GAACGGCAGT TCAGCGTTAA CAAAAAAGGC GAGATCCGTT TCGGGCTTGC GGGCGTAAAG
GGCAGCGGCG ACGCGGCGGT AGAATCCATC ATTGAGGAGC GCGCGAAAGG CGGCCCGTTC
AAAGATGTTT TTGATTTTAT GACCCGGGTT AACCTCCGTA CCGTCAACAA GAAGACACTG
GAAAGCCTGG CGTACGCGGG TGCATTCGAC TGCTTCACCG ACTATCACCG TGCCCAATAT
TTCACAGCTG AACAGGGGGA AAACGGCACG TTCATTGAAA AGCTGATCCG CTACGCCAAC
AATTACCATG CGGAAAAGTC GTCGGCGCAG GCGTCGCTCT TTGGAATGCT CGGCGATAGC
GGTTCCACGC TGGCCAAGCC CAAAGCAGCA GACATTGGTC CGTGGGACGA CTTGGCAAAA
CTGCGTTACG AGCAGGAGGT AGTAGGTTTC TACATCTCAG GTCACCCGCT GGACACATTC
CGTGCGGAAC TCGATAACTT CTGCAACTGC ACGCTCGACA AGGTGATGGA AATCAATGAG
GGTGAACGCG CGCCGAAGTA TTATGGCAAA GACATTAATG TGGCGGGGAT TGTCACGAGT
GCGCAGGAAC GGATGTCGAA AAACGGCAGC TTGTTCATGA TTTTCAAGAT AGAAGATTAC
CAGGGCGCGA TGGAAATGCT GATCGGCGGG GAGGATTATA TCCGTTTCAA AAATTACCTG
CAAGTAGGTC AATTTCTGTA CATTAAAGGA AAAGTCCAGA ACCGCTGGAA GCAGGAAGAC
CAGTTTGAAT TCAAGATTTC GCAAATCCAG CTCCTGCCTG AGATCATGGA GAAAATGTGC
AGGAAAATCA AGATCAACCT TACGCTGGAT CAAATCGACG CACAGTTCAT TCATGTGCTC
AACGAAACCT TCGGAAGCTA CCCCGGCGGG TGCCAGGTAA GCATGACGGT AAAGGACCCC
GAGACGCACC TGGAAGTCGA AATGTTATCG CGCGGTTACC GTGTAGCGCC TAGTAATGAG
CTGTTTAAGG TGCTCAGGGG CTTCCACGGC GTGAAATTCT CCTTAAACTA A
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| Protein sequence | MQFSHLHCHT QFSLLDGAAD IKKLFKKAKE DNMPAVAITD HGNMFGVFEF VAEGNKQGIK
PIVGCEFYVV EDRHVRQFTK DKKDVRHHQL LLAKDEIGYK NLVKMCSLGF IEGMYGKYPR
IDKDLIVQYH KGLIATTCCI GAIIPKTIIR QGEEAAEREF KWWLDLFGDD FYVELQRHDI
RDQYIVNEVL IKFARKYNVK IICSNDSHYV DRDDWNAHDI LLCINTGDKQ STPSAKDFDD
EKGIPKGSRF AFYNDQFYFK KTSEMLQLFN DLPESLDNTN EIVDKIKTLD LRKDILLPNF
PIPDEFKTHT LSEMVGKKEL TADVLNQWEY LRHLTFEGAR KKYDVVTPEI EERLNFELQT
IRNMGFPGYF LIVADFIDAG RKMGVFIGPG RGSAAGSAVA YAIGITNIDP VKYDLLFERF
LNPDRISMPD IDTDFDDDGR QKVIDYVVKK YGYNQVAQIV TYGTMAAKSA IKDVARVMDL
PLPDANMLAK LVPDKPTYNM TLNRIFTAPL EGEGSLMKKE GISPDELENV KRMRAIAVGN
DLQASVLQEA RRLEGTVRNT GIHAAGIIIA PSDLTEIIPV STSKDSDFLI TQYQGKIIED
AGVIKMDFLG LRNLSIIKEA LRMIKNNYGH DIVIDDVPLD DPKVFELFQR GETNAIFQFE
SDGMKKYMRD LIPDRFEHLI AMNALYRPGP IAYIPNFIRR KNGQEEVTYD LPELEEYLAD
TYGITVYQEQ VMLLSQKLAG FTKGQADTLR KAMGKKQIET LNKLKGDFMK GGTEKGLDAK
KLEKIWTDWE AFASYAFNKS HSTCYAFVAY QTAYLKAHYP AEYMAAVLTS SLGSIDKITF
FMEECKNLSL PVLGPDINES ERQFSVNKKG EIRFGLAGVK GSGDAAVESI IEERAKGGPF
KDVFDFMTRV NLRTVNKKTL ESLAYAGAFD CFTDYHRAQY FTAEQGENGT FIEKLIRYAN
NYHAEKSSAQ ASLFGMLGDS GSTLAKPKAA DIGPWDDLAK LRYEQEVVGF YISGHPLDTF
RAELDNFCNC TLDKVMEINE GERAPKYYGK DINVAGIVTS AQERMSKNGS LFMIFKIEDY
QGAMEMLIGG EDYIRFKNYL QVGQFLYIKG KVQNRWKQED QFEFKISQIQ LLPEIMEKMC
RKIKINLTLD QIDAQFIHVL NETFGSYPGG CQVSMTVKDP ETHLEVEMLS RGYRVAPSNE
LFKVLRGFHG VKFSLN
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