Gene Dfer_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0414 
Symbol 
ID8223980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp475546 
End bp476730 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content54% 
IMG OID644928291 
ProductSAM-dependent methyltransferase 
Protein accessionYP_003084848 
Protein GI255034227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.675076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTA CCGAAAAAGC GCGTGAATTT ATTTCAGAAA CCAGCGACAG CCTGCACAAC 
GGCACTTTTG TAAAACTTTC CCTCGGAAAC TACCGCGGGC CCGACGACAC ACTCAAAAAC
ATCTACATCA AGCCGATTCT CATCAAAAAG GAGCCGCGGC TCAGCCTTAC CTACCGCCAT
AAAACGCGGG ATATTGCCAA GAATCACACT TTTGAGGAGG TGGAGCAAAT GCTGCTGCAA
TGGCTGGGCA ACGATTTTCG CGTGGCTACG TTGCAAACCG TCAATTCGGA CACGCTCTTC
GAAATGCACC CAAGCGGCAA GGCTACTTTG AAGAAAAAGG CCGTGTCAGG CCGGGAGGCG
CCCTCGCTCA GTCACGACAA GGCCAAAAAT AGGCTCATCG CCCCGGCGGA GAAGGGCTAC
TTGTTTGACC TGAAAATCAC CGACCAGCAA GGCAATGTGT TTCACAATGC GCAGGACAAA
TTCCGGCAGA TCAACCATTA TATCGACATT CTGAGCAGCC TCATCCGGGA AATCGGACCG
GGCAGGCAGG TAAGGGTAGC CGATATGGGC TCGGGCAAGG GTTATCTTAC ATTTGCCCTT
TACGACTACC TCCGAAATGT GCTCCAACTG GACCCGCAAG TGACCGGCAT CGAGTTTCGC
AACGACCTCG TAACGCTCTG CAATGAGATC GCGCGGAAGG CGGGGTTCGA AGGGCTCTCC
TTCCGCGAAG GCACGATCGA CCAGTTCGAT GCTGCGGGTA CCAATATCCT CATTGCCCTC
CACGCCTGCG ACACGGCTAC GGACGACGCC ATTTTCAAGG GTATCCAGGC GGAATCGGAC
CTGATCGTGG TCGCGCCGTG CTGCCACAAG CAAATCCGCC GCCAGATAGA ACAGCACAAG
GCAGAGAACG ACGTGAGCTT CCTCACCCGG CACGGTATTT TCCTGGAAAG ACAGGCGGAA
ATGGTCACCG ACGGCATTCG TGCGCTGGTG CTCGAATATT TCGGCTACAA AACGAAGGTG
TTTGAATTTA TTTCCGATGC CCACACGCCC AAAAACGTCC TCATCGTGGG AACAAAGGGA
AACAGAAGTG AGAAATCGCA GGCCGCGGCG CTGGAAAAAA TCAGGGAGGC TAAGCAGTTC
TTTGGCATTG AATACCATCA CCTTGAAAGA TTGGCGGGCA TTTGA
 
Protein sequence
MNVTEKAREF ISETSDSLHN GTFVKLSLGN YRGPDDTLKN IYIKPILIKK EPRLSLTYRH 
KTRDIAKNHT FEEVEQMLLQ WLGNDFRVAT LQTVNSDTLF EMHPSGKATL KKKAVSGREA
PSLSHDKAKN RLIAPAEKGY LFDLKITDQQ GNVFHNAQDK FRQINHYIDI LSSLIREIGP
GRQVRVADMG SGKGYLTFAL YDYLRNVLQL DPQVTGIEFR NDLVTLCNEI ARKAGFEGLS
FREGTIDQFD AAGTNILIAL HACDTATDDA IFKGIQAESD LIVVAPCCHK QIRRQIEQHK
AENDVSFLTR HGIFLERQAE MVTDGIRALV LEYFGYKTKV FEFISDAHTP KNVLIVGTKG
NRSEKSQAAA LEKIREAKQF FGIEYHHLER LAGI