Gene Dfer_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0385 
Symbol 
ID8223951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp440196 
End bp442301 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content55% 
IMG OID644928262 
Productmetallophosphoesterase 
Protein accessionYP_003084819 
Protein GI255034198 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00164005 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.49014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC ATTTACTCAC TTTCCTGCTG CTTATTTCTT TTCTTTCCAC GCACGGCCAG 
GGCACGCTCC TGCGCGGCCC GTACCTGCAA ACGGTCACGC CTACGAGCAT TGTCATCCGC
TGGCGTACCG AGCAGCCGTC CAATTCGGTG GTGAAAATCG GCACAAGCCC GGAATCGCTC
GGGCAGACGT TCAGCGACAA TGCGGCTACC ACCGAGCACG AACTGAAACT TACCGGCCTG
CAAAATGAAA CACGCTACTA TTATTCCATC GGCTCGCAAA CGGAGGTTTT GCAGGCGGGC
GCACAGAATT ATTTCGAAAC ATCAGCACCG GCGGGCAAGC CGGGTAAATA CCGCTTCGGC
GTGATCGGCG ATTGCGGCAA CAGCTCCGCC ACCCAGCAAG CCGTGCGGGA TAAAATGACC
GATTACCTGG GCAACAACTA CATGAATGCG TGGCTTCTCC TGGGCGATAA TGCCTATTCA
TTTGGCCGAG ATGCGGAGTA TCAGGCCCAT TTTTTTGCTC AATACAAAAA CCATTTTCTC
AAAAAAAGCC CCCTGTTCCC TACCCCCGGC AACCACGATT ACGATAATGA CAACCCGGCC
CGCCAGGACG ATCACCAGGT TCCCTACTAC GATATTTTCA CCATGCCTAC GCAAGGCGAA
GCGGGCGGCG AGCCCTCAGG CACAGAAGCG TTCTATTCGT TCGATTACGG CAATGTCCAT
TTCCTTTCCC TGGATTCGTA CGGCAGAGAA GACAATGCAA CCAGGCTTTA CGACACGCTC
GGCAGGCAGG TGCAATGGAT CAAAAAAGAC CTGGCAGCCA ACAAAAACAA GGATTGGGTG
GTAGCCTACT GGCATCATCC GCCCTACTCG AAAGGCTCGC GCGAATCGGA CCGGGACCCG
GAAATGACGG CCATCCGGGA GAATTTCATC CGCATTCTCG AACGCCTAGG TGTAGACCTC
ATCCTGTGCG GACACAGCCA CGTGTACGAG CGATCCCGGC TTATGGGCGG GCATTACGGG
CATAGCAGCA CATTCGATGC GGACAAGCAC GTGATCGACG GCTCCTCGGC GCGGTACGAC
GGCTCCGACA ATTCATGCCC CTATATCAAA AACACGCCGC AGGCCCGCGG CACGGTGTAC
GTGGTGGCAG GCTCCGGCGG GCAGCTGGGT AACCTCCGCG CGGACGCCCC TCACAAAGCC
ATGTACTATT CCGACGCCGA ACGTGGCGGC GGACTTATGC TCGAAGTGGA AGGCAACCGA
CTGGACCTGA AATGGATAGC TGCCGACGGC GTGGTGCGCG ACCAGTTTAC GATGGAAAAA
GGCGTGAATA AGGAAACTAC CCATGAAATC GCCCATGACG AATCGGTTGA ACTCACCGCG
TCGTTCGTCG GAAGTTATGT CTGGGACAGC GGGGAAAAGA CGCGGACGAT CACCGTCCGG
CCTGATGAAG ATGCAGAATA TACCGTGCGG GACGCTGAAA ACTGCATTCA GGATGTTTTT
CATGTGAAAG TCCCCAAGAC CGATCCCGCC AAGCTGGTGG CTTTTACCGT GAAAAACGAC
CAAGCCAATG TCGTGACATT GCAATGGACC ACCGAAACGG AGACCGAACT ATCGCATTTT
TTAGTCCAGC GCTCAATAGA CGGCCGTACA TTTACTGAAA TAGGCAAAGT TACCGGCGGC
CCCAACTCGC AGCTGTTGAA GGAATATTCT TTTACGGACA CACAAAGCGC CACTTTGCCG
ACCAACCAGG ATTACTACTA CCGGCTGGCC ACGGTTGCCC AGGACGGGCG CGTTGTTTAT
TCGAGAATCA ACCGGGTGTA CTTGCTGGAC ATTGTCCTTT CCGCCGACCC GAGCATTGCA
CTGGAAGTGG AAATCATTCC CAATCCTTCA TCGGCCAGCC AGATGCAGAT CCGCACGGCC
GGCAATGCCA CGCAGCTCGC CGAACTGACG CTCATCGACA TTTCCGGCAG GACGTTGCAG
ACCCGCAAGA TGACCATCAG CAACACCCCG GCCACGTTCC TGCCGCCCCA ACTCACGGCC
GGAACGTATT TTCTGAAAGT GGATGTAAAT GGCAGAAGTG TCGTAAAAAA GCTCGCGATC
CATTAA
 
Protein sequence
MKQHLLTFLL LISFLSTHGQ GTLLRGPYLQ TVTPTSIVIR WRTEQPSNSV VKIGTSPESL 
GQTFSDNAAT TEHELKLTGL QNETRYYYSI GSQTEVLQAG AQNYFETSAP AGKPGKYRFG
VIGDCGNSSA TQQAVRDKMT DYLGNNYMNA WLLLGDNAYS FGRDAEYQAH FFAQYKNHFL
KKSPLFPTPG NHDYDNDNPA RQDDHQVPYY DIFTMPTQGE AGGEPSGTEA FYSFDYGNVH
FLSLDSYGRE DNATRLYDTL GRQVQWIKKD LAANKNKDWV VAYWHHPPYS KGSRESDRDP
EMTAIRENFI RILERLGVDL ILCGHSHVYE RSRLMGGHYG HSSTFDADKH VIDGSSARYD
GSDNSCPYIK NTPQARGTVY VVAGSGGQLG NLRADAPHKA MYYSDAERGG GLMLEVEGNR
LDLKWIAADG VVRDQFTMEK GVNKETTHEI AHDESVELTA SFVGSYVWDS GEKTRTITVR
PDEDAEYTVR DAENCIQDVF HVKVPKTDPA KLVAFTVKND QANVVTLQWT TETETELSHF
LVQRSIDGRT FTEIGKVTGG PNSQLLKEYS FTDTQSATLP TNQDYYYRLA TVAQDGRVVY
SRINRVYLLD IVLSADPSIA LEVEIIPNPS SASQMQIRTA GNATQLAELT LIDISGRTLQ
TRKMTISNTP ATFLPPQLTA GTYFLKVDVN GRSVVKKLAI H