Gene Dfer_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0379 
Symbol 
ID8223945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp432863 
End bp433423 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID644928256 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_003084813 
Protein GI255034192 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00405632 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0357921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC ACATTCTCCC TGCGGTCCGA CTGACAGTCG TGACGCTGAT ATTCTTCTCC 
GGCGTGTATA CGCTGGCGGT TTTAGGGGCG GCGCAGCTCT TTCCGAATCA GGGAAAGGGC
GAGATCATTG AGCAAAATGG TAAGCGGTAT TATGCCAATA TCGGGCAGTC GTTTACGGAT
GACAAGTATT TCAATTCGCG CCCTTCGGCG GTGGGCTATA ATGCGGCTGG TAGCGGCGGG
AGTAACAAGG GCCCTTCGAA TGAGGAGTAC CTGGTTGTGG TGCAGGCGCG TATCGATACT
TTTCTCGTGC ACAATCCCAA TGTACAAGAG GCAGACATTC CCGTGGAGCT GGTCACAGCC
AGCGGCAGCG GCCTCGATCC GGATATTTCT GAAAAAGCCG CGCTCGTGCA GGTTGAGCGT
ATTGCGAAGA TTCGGAATGT GCCTGTGCAG ACATTACAAG ACCTTGTGAA AGCGCACATT
CAAGGACCGC TGCTCGGAAT GTTCGGGCCG GAGAAAGTGA ACGTGCTGCG GTTGAACCTC
GCATTGGATC AATTGAAATA A
 
Protein sequence
MKQHILPAVR LTVVTLIFFS GVYTLAVLGA AQLFPNQGKG EIIEQNGKRY YANIGQSFTD 
DKYFNSRPSA VGYNAAGSGG SNKGPSNEEY LVVVQARIDT FLVHNPNVQE ADIPVELVTA
SGSGLDPDIS EKAALVQVER IAKIRNVPVQ TLQDLVKAHI QGPLLGMFGP EKVNVLRLNL
ALDQLK