| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0358 |
|---|
| Symbol | |
|---|
| ID | 8223924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 414072 |
|---|
| End bp | 414650 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644928235 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003084792 |
|---|
| Protein GI | 255034171 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00654303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.458224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA AAATTAATAG TTACGCACTG AGGTGCCTGC CTTTCACAGC GCAGGACCTC
GATCATTTCG ATTCTTTACT TCAACACAAA ACCTTTCCGA AAAAGACCTT CCTCTTGCAG
CAGGGCGAGG TTTGTCAGTT TGAAGCCTAC ATTCTCAAAG GCTGCATCCG CACTTATTAT
ATTGATAGCA ACGGGGCGGA AGTAACGCTG CAATTTGCCG TGGAGGATTG GTGGGTGAGT
GACATTACCA GTTTTCATAA CCAGTCGCCC AGCCACGTTT ACATTGAAAC GCTGGAAGAT
TGCGAAGTGC TGATTCTCAC GCCCGAAACC AAGGAAAAGC TCCTCTCTAC CGTCCCGGGC
TTCGAACGTA TGTTCCGCCT GATGGTGCAA CGCAACCTCG CCCAAACGCA GGAACGCCTA
TTCAGGACGA TTTCCACGAG CGCCGTCGAA AAATATCTCG ATTTTTTGAA TCGCTATCCC
GCTATTCCAC AGCGTGTTGC GCAGCATTAC ATTGCTTCTT ATCTGGGTTT TTCACCGGAG
TTTTTAAGTA AAGTCAGGCG GAAGCTGAGT GAAAAGTAG
|
|---|
| Protein sequence | MFEKINSYAL RCLPFTAQDL DHFDSLLQHK TFPKKTFLLQ QGEVCQFEAY ILKGCIRTYY
IDSNGAEVTL QFAVEDWWVS DITSFHNQSP SHVYIETLED CEVLILTPET KEKLLSTVPG
FERMFRLMVQ RNLAQTQERL FRTISTSAVE KYLDFLNRYP AIPQRVAQHY IASYLGFSPE
FLSKVRRKLS EK
|
|---|
| |