Gene Dfer_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0315 
Symbol 
ID8223881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp358074 
End bp359009 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content53% 
IMG OID644928193 
Productglycosyl transferase family 2 
Protein accessionYP_003084750 
Protein GI255034129 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.357577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACC CGCCGCTGAT ATCCATTGCC CTGTGCACGT ATAATGGCAG CGCATTTCTC 
CGGGAGCAGC TGGATTCCAT CCTGGCGCAG CGGTATGCCC ATTGGGAACT GGTGGTGGTG
GACGATGGCT CCACCGATCC CACACGCGCC ATTCTGGAAG AATATGCGGG AAGCGATGCG
CGCATCAGCC TGCATTATAA CCGGCAAAAC CTCGGTTATA ACAAAAACTT CGAAAAGGCG
CTGGGCCTTT GCCAAAGTGA CCTCATCGCC ATTTGCGACC AGGACGATAT CTGGCATCCC
GAAAAGCTGG AAAAACAGGT GCAGCTCATC GGCAACCACA CGCTGGTGTA CCACGATTCC
GAGTTTGTAA ATGCCGAAGG CCGCTCCATG AACCGCCGCA TTTCGGACAA GCTGAATTTC
TACCGCGGCA ATGCGCCCGA AGTGTTCCTG TTTTTGAACT GCGTTTCCGG CCACAGTATT
TTGTTAAAAA AAGAGGTATT GCAAAAATCG CTGCCGTTCC CGGGTAACTT CCATTACGAC
CAGTGGCTTG CATTCAACGC CGCCTGCCTG GGCAGTATCG ATTTTGTGCC GGAAACATTG
GTAAAATACC GCCAGCATGC GACCAACAAT ACCGATATCC TCGCCTTGAA AAAGGTAGCG
AAAAGCGCGG ACCAGAAAGC AGCGGCATTG GAACAGGAAA GCAACTGGCT CCACCTTTGC
GCACGGCAAT GCACAGGTCA GGCGCACGGG CTGATCAATG CATTATACAA CCAGAGCATC
CGGCGCAACG ACCGCTTTTT CGACCCGGCG TTTGGAATAC TCGTGTGGAA ACACCGCGAT
ACCTTGCTGC GGCTGCTGAA AAAGTCGGAT ACCAGCAAGT TTTTTTACGC GCTCCGAAAG
GCATGGGGCG TGAAAGCTAA AATGACAGGA AAGTGA
 
Protein sequence
MENPPLISIA LCTYNGSAFL REQLDSILAQ RYAHWELVVV DDGSTDPTRA ILEEYAGSDA 
RISLHYNRQN LGYNKNFEKA LGLCQSDLIA ICDQDDIWHP EKLEKQVQLI GNHTLVYHDS
EFVNAEGRSM NRRISDKLNF YRGNAPEVFL FLNCVSGHSI LLKKEVLQKS LPFPGNFHYD
QWLAFNAACL GSIDFVPETL VKYRQHATNN TDILALKKVA KSADQKAAAL EQESNWLHLC
ARQCTGQAHG LINALYNQSI RRNDRFFDPA FGILVWKHRD TLLRLLKKSD TSKFFYALRK
AWGVKAKMTG K