Gene Dfer_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0314 
Symbol 
ID8223880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp357031 
End bp358077 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content51% 
IMG OID644928192 
Productglycosyl transferase family 2 
Protein accessionYP_003084749 
Protein GI255034128 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.5289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.534474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAACC AACCCGAATC TGATATTCCC AGCACACCCT ACCCGCTCGT TTCGATCGCA 
TTGTGTGTTT ACAATGGCGA AAAGTACCTT GGCGAACAGC TCGATTCGCT CGTAAACCAG
ACTTACCCGA ACATCGAGAT TGTGGTGGTG GACGACGGCA GCCGCGACCG CTCGCGCGAA
ATCCTCCGCA GCTACGCGGA GCAATACCCG GTTTTCAGGA TTTTTGAAAA CGAGGCGAAC
CTGGGTTATG TGAAGAATTT CGAGAAGGCG ATCAGCCTGT GCGAGGGCGA GTATATTGCG
CTATGCGACC AGGACGACAT CTGGGACCTC GAAAAGATCA GCAAACAGGT AGCGGGAATC
GGCGATAACC TGCTCATTTA CCACGATTCG GCATTTATGG ACGAGCAGGG CCGGCAAATG
ACCTGGAAAC GGAAAATGTC GGAGATCATT CACCTCTACC GCGGCGATGA TCCGAAGGTT
TTTCTGTATT TCAATTGCGT ATCCGGCCAT AGCATTCTCT TCAAGCGCGA CCTGCGTGAT
GATTTTCTGC CGTTTAACCC CGACCATTTC CACGATCACT GGATCGCCTA CGTGGCGGCC
AACCTCGGCA GCATTGAAGT GATCAACGAA ACGCTCGTAC GGTACCGCCA GCATACCACG
GCTTCGACGG ACATTCTCAA CAAGCGGAAA AAGATCCGGA AAAACTACCA TGAAAACCGC
GACATCAAGA AGCTCAAACG GGACCTTGCA TGGGTGCAGC AGTGCGCTTC GTTCCACAAG
AACCGCGACC AGCCATTCCT CGACCGGCTC CGTTCGCTGT TCGAAGAGCG CCTCGAATCG
TTCTTTTCAT TTGAATATGC GGGCATTATC CGCGACAATT ACGAGCAGCT GTATTTCATT
CCCGTTTATA AAAAATCCAG CAAGTTCAGC TTCGTTTACC GCCAAATCTG GGGTTTGCGT
GCCAAATTGC TCTGGGCTAG GTTCTTTGCT CGTCCGGAAA CGGAAGAATA TGTAGATATA
ACTTTAAAAG GTGAAGAAAA CCTTTAA
 
Protein sequence
MNNQPESDIP STPYPLVSIA LCVYNGEKYL GEQLDSLVNQ TYPNIEIVVV DDGSRDRSRE 
ILRSYAEQYP VFRIFENEAN LGYVKNFEKA ISLCEGEYIA LCDQDDIWDL EKISKQVAGI
GDNLLIYHDS AFMDEQGRQM TWKRKMSEII HLYRGDDPKV FLYFNCVSGH SILFKRDLRD
DFLPFNPDHF HDHWIAYVAA NLGSIEVINE TLVRYRQHTT ASTDILNKRK KIRKNYHENR
DIKKLKRDLA WVQQCASFHK NRDQPFLDRL RSLFEERLES FFSFEYAGII RDNYEQLYFI
PVYKKSSKFS FVYRQIWGLR AKLLWARFFA RPETEEYVDI TLKGEENL