| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0272 |
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| Symbol | |
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| ID | 8223838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 308381 |
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| End bp | 310504 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928150 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_003084707 |
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| Protein GI | 255034086 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.369574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTT GTATTGCAGA AAAACCCAGC GTAGCCAAAG ACATTGCAGC GGTAATCGGC
GCAGGCCAGC GCCGCGACGG TTATTACGAA GGCAATGGCT ACCAGGTAAC GTGGACATTC
GGCCATTTCT GCACCCTCAA AGAACCGCAC GACTACACCG AACGCTGGAA ATCGTGGCGG
CTGGAAGAGC TCCCGATGAT CCCTTCCAGC TTCGGAATCA AGCTGATAGA CAATGAAGGC
GCCATGCGGC AGTTCGGCGT GATCGAAACG CTCGTGCGCA ACTGCGAGGA GGTGATCAAC
TGCGGTGACG CCGGCCAGGA AGGCGAGCTC ATCCAGCGCT GGGTGCTGCT CAAAGCCAAA
TGCAACGTTC CCGTGAAGCG GCTCTGGATT TCGTCCCTCA CCGAGCAGGC GATCCGCGAG
GGCTTCGAAA AGCTGCGCGA GGCCAGCCAA TACGACAATT TATACGCCGC CGGCAGCGCG
CGCGCCATCG GCGACTGGCT GCTGGGCATG AATGCGACGC GGCTTTTCAC TAAAAAATTC
GGCGGCGGCA AGGCCGTGTT ATCCATCGGC CGCGTACAAA CGCCCACGCT CGCGCTCATC
GTGCAGCGGC AAAAGGAGAT CGACGCATTC GTTTCGGAAG AATATTGGGA GCTCAAAACC
ATTTACCGCG AAACCGAGTT CACAGCCACG ATCGACCGCA TTAAGAATGT AGAAAAAGCC
AATAAGGGCC TCGCTTACCT CCAACAGCAC GATTTCGAGG TTACCGCTTT TGAAAAAAAG
GAAGGCAAGG AAGGCAATCC GCGGCTTTTT GACCTCACTT CGTTGCAGGT CGAGGCCAAT
AAGAAATACG GTTATTCGGC AGAAGATACT TTGAAGCACA TTCAAAATCT TTACGAAAAG
AAGTTTGTGA CTTACCCGCG GGTGGATACC ACTTATTTGT CGGAAGATTT ACATCCGAAA
GTGGAGGGTA TTCTCCGCGA ATTGACCTAT TATAGCCAAT TCACGGCACC GCTGCTGGCG
AACCTGCCCA TTCCGAAGTC CAAGAATGTG TTCGACGACA AGAAGGTCAC CGACCACCAC
GCCATTATCC CTACGGGCGT GCTTCCGGCG CACATTAGTC AGGATGAAAA GCGCATTTAC
GACCTGATCG CCCGTCGCTT CATCGCGGTG TTCTATCCCG AATGCCGGGT TTCCAACACC
ACAGTCCTCG GCGTGGTCGG CCAGGTGGAG TTCAAAGCCA CAGGTAAGCA AATCCTTGAA
CCCGGCTGGC GGGAGCTGTA CGCGAATGAT AACGCATCCA AAAAAGAAGC GGAAGAAGAA
AAGGTAATGC CGATTTTCGA AGTAGGCGAG CGGGGTCCGC ACGAGCCGCG GGTGCACCAG
GGCAAAACAT CACCGCCGAA AGCTTACACC GAAGCCACGC TGCTGCGCGC CATGGAAACG
GCAGGCAAGC AGGTGGAGGA CGAGGAAATG CGCGAGTTGA TGAAAGACAG CGGCATCGGC
CGCCCGTCTA CCCGCGCGAA CATCATCGAG ACGCTCTTCA AGCGTAAGTA CATCGAAAAG
AAGAAGAAGA ACGTATTCGC CACCCAAACG GGCATTGACC TTATCGACAC CATTCAGAAT
GAGCTTTTGA AAAGCGCAGA ACTGACCGGG CATTGGGAGC GGAAGCTGCG CCAGATCGAA
AAGGGCGAAT ATGCGATGGA CACTTTCAAG CAGGAGCTGA TCGACATGGT GGTGAAGCTC
ACGCACGAGG TGAAGAACGA GCGGGCGCGG TCCATCACCA TTGTCGAAGA AGCACCGGTG
GCCGAAAAAG AGGAAAAGCC CAAAAAGGAG CGAAAACCCC GCGAGCCGAA AGAAGATATC
GCGATTGAAA CCCTCAACTG CCCCAAATGC AGGGAGCATC TGTTGAAAAA GGGCAAAACC
GCCTACGGAT GCAGCAATTT CCAGGCTTGC GGCTTTAAAA TACCATTCGA ATTCCTGGGC
AAGAAGCTGA CCGACAAGCA CATTTTCGAC CTGCTAAGCA AAGGCAAAAC GGTCAAAATC
AAAGGCCTGC AAATCCCCGG CAGCCCCGAC CCCATTGACG CCCGCCTGGT CATGAACGGC
GACTTCAACT TTGAAGTCGG CTAG
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| Protein sequence | MKVCIAEKPS VAKDIAAVIG AGQRRDGYYE GNGYQVTWTF GHFCTLKEPH DYTERWKSWR
LEELPMIPSS FGIKLIDNEG AMRQFGVIET LVRNCEEVIN CGDAGQEGEL IQRWVLLKAK
CNVPVKRLWI SSLTEQAIRE GFEKLREASQ YDNLYAAGSA RAIGDWLLGM NATRLFTKKF
GGGKAVLSIG RVQTPTLALI VQRQKEIDAF VSEEYWELKT IYRETEFTAT IDRIKNVEKA
NKGLAYLQQH DFEVTAFEKK EGKEGNPRLF DLTSLQVEAN KKYGYSAEDT LKHIQNLYEK
KFVTYPRVDT TYLSEDLHPK VEGILRELTY YSQFTAPLLA NLPIPKSKNV FDDKKVTDHH
AIIPTGVLPA HISQDEKRIY DLIARRFIAV FYPECRVSNT TVLGVVGQVE FKATGKQILE
PGWRELYAND NASKKEAEEE KVMPIFEVGE RGPHEPRVHQ GKTSPPKAYT EATLLRAMET
AGKQVEDEEM RELMKDSGIG RPSTRANIIE TLFKRKYIEK KKKNVFATQT GIDLIDTIQN
ELLKSAELTG HWERKLRQIE KGEYAMDTFK QELIDMVVKL THEVKNERAR SITIVEEAPV
AEKEEKPKKE RKPREPKEDI AIETLNCPKC REHLLKKGKT AYGCSNFQAC GFKIPFEFLG
KKLTDKHIFD LLSKGKTVKI KGLQIPGSPD PIDARLVMNG DFNFEVG
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