| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0262 |
|---|
| Symbol | |
|---|
| ID | 8223828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 295562 |
|---|
| End bp | 296881 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644928141 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003084698 |
|---|
| Protein GI | 255034077 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.726254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.402954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGA TGCGGCCGCG AGCGCTGGCC GGCAAACGTA TCATCAATAT GGAACCAAAG
AAGGTAGTGA TCGTAGGCGG CGGTTTCGGG GGCATTAATC TCGCCCAGAA GCTTTCCCGC
AACAAATCAT TTGAAATAGT GCTGGTGGAT AAGAACAACT ATAATTTCTT CCCGCCACTG
CTGTACCAGG TAGCTACGGG CTTCCTGGAA GCTTCCAATA TCAGCTACCC GTTCCGCAAG
TTTTTTCAGG AAAAAAGCAA CCTTCGGTTT AGCCTCGGCG CGTTCGAGCG GGTATTTCCG
GAGGAAAAAA GGATAGCTAC CGAAAGCGGC GATATTTATT ATGATTACCT CGTGTTCGCC
ACGGGCACCG AAACCAACTA TTTCGGGATG GAGAATGTGC GCAAAAACGC GGTGCCGATG
AAAACAGTCC AGGATGCGCT GGCCTTGCGC AACCACATTC TCCGGCTCAA AGAACAGGCC
ACGAAGGAAG CCGATCCGGC CGTGCGCCGA AAGCTGCTCT CGATCGTGGT GGCTGGTGCC
GGGCCTACCG GCGTGGAAGT GTCGGGAATG CTCGCCGAAA TGCACCAAAA CATTTTCAAG
AAAGACTACC CGGAATTGAA GCGGGAAGAA GTGCAGATTT ATCTGGTGGA CGCATTGCCC
GTGGTATTGA ACCCAATGAG CAAGAAATCA CAGGAAGAAA CGCTGGCGGA GCTCCGCGGC
CTGGGCATTG AAGTCCTGCT GGACCATGCG GTGAAAGACT ACCAGGATGG CATTGTGACA
TTCGCCAACG GCAAAACGAT TACTACCGAA ACGCTCATCT GGACATCGGG CGTGACGGCC
ACGGCGCTGC CCGGGCTGCC CGACGATGTG CTGGGAAGGG GCAAACGTGT GCTGGTGGAC
GCCTATAACC GCGTGAAGGG CTTCGATAAC ATTTTCGCGA TCGGCGACAT TTGCTATATG
GACGCCGATC CTGACTTTCC GAACGGCCAT CCACAGCTCG CGCAGGTGGC TATTCAGCAG
GGCAGAAACC TGGCCCACAA CTTCCCGCTG TGGCTGCAAG CGACCTCGCC GCGGCCATTC
CGGTATAAGG ATAAGGGTAC CATGGCGATT ATCGGTGTTA ACAAGGCGGT TGCCGACTTG
CCGGGCTTGC ATTTCAAAGG CTTTATCGCG TACTTCCTGT GGCTGGTAGT GCACCTCTTT
TCGCTGATCC GCTACCGTAA CCAGGTGAAA ACCTTTTACA ACTGGATGGT GGCGTTTTTT
ACGAGGGACC AATCGTTGCG TTTTATCCTC GATCCGAAGC CGGAGAAGCC CGCTCACTGA
|
|---|
| Protein sequence | MQPMRPRALA GKRIINMEPK KVVIVGGGFG GINLAQKLSR NKSFEIVLVD KNNYNFFPPL
LYQVATGFLE ASNISYPFRK FFQEKSNLRF SLGAFERVFP EEKRIATESG DIYYDYLVFA
TGTETNYFGM ENVRKNAVPM KTVQDALALR NHILRLKEQA TKEADPAVRR KLLSIVVAGA
GPTGVEVSGM LAEMHQNIFK KDYPELKREE VQIYLVDALP VVLNPMSKKS QEETLAELRG
LGIEVLLDHA VKDYQDGIVT FANGKTITTE TLIWTSGVTA TALPGLPDDV LGRGKRVLVD
AYNRVKGFDN IFAIGDICYM DADPDFPNGH PQLAQVAIQQ GRNLAHNFPL WLQATSPRPF
RYKDKGTMAI IGVNKAVADL PGLHFKGFIA YFLWLVVHLF SLIRYRNQVK TFYNWMVAFF
TRDQSLRFIL DPKPEKPAH
|
|---|
| |