Gene Dfer_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0253 
Symbol 
ID8223819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp283752 
End bp284906 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID644928132 
Productglycosyl transferase group 1 
Protein accessionYP_003084689 
Protein GI255034068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.674874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAC TCAATATTTG TGCATACACA TGGGCAATCG GAGGCCCGGC CCGCATTATC 
TACGACCACA CCACGGAGGT GGTAAAGCAG GGCCATCAGG TGGATATCCT GAGCCCGATG
ACGCCCGGCG AAAAGATGTA CCCGGTGCCC GAGGGTGCGC GGCTGATCGC GGTCGCACGC
ACGACGCCCA TCAGCAATGT CTATCGGGAG TTTTCCATCG ATTTGTACAA ATACCTCAAA
AAGCACATTC ACGAATATGA CGTCGTGCAC ATGCACGGCA TCTGGCATTT CGGCAGCCTG
GCGCCCTTCC TGATCCCTTC CAGAGCTGTG AAAGTGATCA CGATCCACGG GTTGCTCGAT
AAATGGGCCG TGTCGCACAG CAAGTGGAAG AAAGACCTCG TCACCATTTT ATACCAAAAA
AAGCTGCTCG GCCAGGCCGA CCTCATCCAG ATCAACAACA CGGACGAGGA ACAGGATGTG
ATCCGTTACC TCGGCTACCG CCCGAAAAAC ATGGTAATCG TGCCGAACGG CATGAAACTG
GACGAGTACA CGCGCTCGCA TTTGCCTGAA AAAGGGCTTT TCAGGGCCAA ATACGGCATT
TCGCCCGACC AGCAAATGGT GCTTTTCATG GCCAGGCTGA ATATTAAAAA GGGCCTTGAC
CTGCTGCTAC CCGCATTTCA GCAGGTTCAT GAGCAGCTGC CGCACGCGCA GCTCATCCTG
GCCGGGCCCG ACGACGGTTA CCAGGCCGAA ACGGAGGCAT TCATCCGGAA ACATCGCCTC
GAAAACCGCG TGAAGCTCGT GGGAATGCTT ACCGACACTA TCAAAAAGGA GGCGCTAGCC
GACGCCGACC TTTTCGTATC GCCTTCCTAT TCCGAGGGTT TTTCGATCGC CGTGCTCGAA
GCCATGACGT CCGGCGTGCC CGCGCTCGTA TCCGACCGCG TGGGCTTTGG GGACTATATC
GCGCGCTACG AAGCTGCCTG GCTGACGCCG CTCACGTGCG ATGGCGTGGC CGAGGGACTT
CTTAAAATAT TACAAGACAA AACGTACGCG GAAGCGATCG CAAATCGAGC CTACAAGATG
GTTACCGAAA ACTTTGACAT CCGGGTGGTT GCCAATCAGT TATTGGAAGA ATACAAGAAA
GTTCAAAAAA AGTAA
 
Protein sequence
MRILNICAYT WAIGGPARII YDHTTEVVKQ GHQVDILSPM TPGEKMYPVP EGARLIAVAR 
TTPISNVYRE FSIDLYKYLK KHIHEYDVVH MHGIWHFGSL APFLIPSRAV KVITIHGLLD
KWAVSHSKWK KDLVTILYQK KLLGQADLIQ INNTDEEQDV IRYLGYRPKN MVIVPNGMKL
DEYTRSHLPE KGLFRAKYGI SPDQQMVLFM ARLNIKKGLD LLLPAFQQVH EQLPHAQLIL
AGPDDGYQAE TEAFIRKHRL ENRVKLVGML TDTIKKEALA DADLFVSPSY SEGFSIAVLE
AMTSGVPALV SDRVGFGDYI ARYEAAWLTP LTCDGVAEGL LKILQDKTYA EAIANRAYKM
VTENFDIRVV ANQLLEEYKK VQKK