Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0202 |
Symbol | |
ID | 8223768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 227875 |
End bp | 229647 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644928081 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003084638 |
Protein GI | 255034017 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.940477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.073291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTG AAACTTTTCA AACTTTCGAA GAGCTTGGAC TCAACGAAAA CATCCTGAAA GCCTTGCAAG AAATGGGTTT TGAAAAACCC TCACCGATAC AGGCACAGGG AATCCCGGCA GTTTTGCAGG GCTCTGACGT AATTGGTCAG GCTCAAACCG GTACCGGTAA AACTGCGGCA TTCGGTATTC CCGTGCTGGA AAGAATAGAT ACATCCAGTA ATGCAGTACA AGCCCTGATC CTCTGCCCTA CCCGCGAACT CGCGGTGCAG GTTTCGGAAG AACTCGGCCG TCTGTCCAAA TTTATGCGTG GCGTGCGCAT CGAAGCCATC TACGGTGGTG ACTCGATCGA CCGTCAGATC CGCTCCCTGA AAAAAGGTGT ACACATCGTT GTAGGAACTC CGGGCCGTGT AATGGACCAC ATGGAGCGCC GCACCCTGAA ATTCGACGAA GTACGCATGA TGGTACTCGA TGAGGCTGAC GAAATGCTCG ATATGGGCTT CCGTGAGGAC ATCGAGAGCA TCCTGGCCGA CATGCCGGAA GATCGCCAGA CGATCCTTTT CTCGGCAACC ATGTCGAAGC CGATCATGTC GATCACCAAG CGCTTTTTGA ACGACCCTAC CTTAATTAAG GTAGTTCGCA ACGAGCTGAC CAACCAGAAT ATCGAGCAGG TTTACTTTGA AGTAAAACCA CAGGCGAAAG TCGAAGTAAT GACCCGGCTG ATCGATATGC ACCACATTAA GTCCCTGCTG GTTTTTTGTA ATACCAAACG CAAGGTGGAC GAGATTGTGG AAGACCTGCA ATTGCGTGGT TACGCTTCGG AAGGTATCCA CGGAGACCTC CGCCAGCAGC AGCGCAGCAA TGTTATGAGC AAATTCAAGG CGGGTGTTAC TACTATCCTG GTTGCTACTG ACGTTGCAGC ACGCGGTATC GACGTAAGCG GACTGGATGG CGTGATCAAC TACGACATTC CGATGGACGA AGAATATTAC GTACACCGGA TCGGCCGTAC GGGGCGTGCG GGAATGTCGG GTAAGGCGTT CTCACTCGTT GCCCGTGACG AAAAATACCG TCTGAAATCC ATTGAAAGCT ATACCAAGGT TAAAATCGAG AAAGGGGTAA TTCCTTCATT CGAAGATATC GTAGGTGTTC GTAAGGCACG TTTTGTGGAG AATATTTCAA ACTCCATCAA AGAAAGCAAC GACGAAGAAC TGTACAACGA CGTACTTGAA ATGCTGCACC ACAGCGGTTT CTCAACCGAG CAAATCGTAG GCGCAATGGC GAAGCAGATC ATGGGCGTTC AGAAAAACGA ATACTCCGAC AGCAACCTCG CATGGGAAGA GCGTCGCAGC GAACGTCGCG AAGGCGGTAA CGACCGCTTC GGTCGTGGCG AACGTCGTGA AGGCGGCCGT TTCGGTGATC GTCGCGAAGG CGGAAGCCGT TTCGGCAGTG ACCGCGGAGG CGACCGTTAT GCACCGCGTG GCGAGCGTGG CGACAGAGGT GGTGACCGCG GAGAGCGCCG TCAGTCGGCC CCCGAAGCTG GTATGACCCG CTTGTTCCTG AGCTTGGGCC GTAAAGACCA CATCATGCCG AAAGACATCG TGGGTGCTAT TGCCGGCGAA GCCAACATTC CGGGCAAAAC CATCGGTGCG ATCGACATTT ACGACAAATT CACTTTCGTA GACGTACCTG AGCGCGATGC ACGCGCGGTA TTGCGTGCGA TGGATGGCAA CACCATCAAA GGCAAGCCGG TGCAGATCGA CATTGCAAAA TAA
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Protein sequence | MTTETFQTFE ELGLNENILK ALQEMGFEKP SPIQAQGIPA VLQGSDVIGQ AQTGTGKTAA FGIPVLERID TSSNAVQALI LCPTRELAVQ VSEELGRLSK FMRGVRIEAI YGGDSIDRQI RSLKKGVHIV VGTPGRVMDH MERRTLKFDE VRMMVLDEAD EMLDMGFRED IESILADMPE DRQTILFSAT MSKPIMSITK RFLNDPTLIK VVRNELTNQN IEQVYFEVKP QAKVEVMTRL IDMHHIKSLL VFCNTKRKVD EIVEDLQLRG YASEGIHGDL RQQQRSNVMS KFKAGVTTIL VATDVAARGI DVSGLDGVIN YDIPMDEEYY VHRIGRTGRA GMSGKAFSLV ARDEKYRLKS IESYTKVKIE KGVIPSFEDI VGVRKARFVE NISNSIKESN DEELYNDVLE MLHHSGFSTE QIVGAMAKQI MGVQKNEYSD SNLAWEERRS ERREGGNDRF GRGERREGGR FGDRREGGSR FGSDRGGDRY APRGERGDRG GDRGERRQSA PEAGMTRLFL SLGRKDHIMP KDIVGAIAGE ANIPGKTIGA IDIYDKFTFV DVPERDARAV LRAMDGNTIK GKPVQIDIAK
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