| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0171 |
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| Symbol | |
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| ID | 8223737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 196831 |
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| End bp | 199437 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928050 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003084607 |
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| Protein GI | 255033986 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.766824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCC GCCTGACAAC TGACTCATTC AGATGGTATT ATGCCAGTAT TTACCTGGGA
TTGGCATTGA TTTTCGGCTC CCAGTATTTC ACCTACAAGA ACGTCCGCGA CCTTTCGCTC
AACAACGAGC GCCTCAATGT GACGATCGGC GTGCTGAACC AGACGGCTAA TTTCGGGCTT
GTCACCAAAG ATTTTCAGTC GAATATGCGC GGTTATCTGA TCACGCAGGA TAATGAACTG
CTTTCGGATA ACTACAACAA GAAGATCCAG CTCGTGAGCA TTACCGACAC GCTGTTCAAC
CTTGTTAAAA CTGACGAAAC GCAGACGCGG CGCGTGAAGG AACTACTGAG CATTTCGAGC
CAGATCGTCG CCTACACGCA GAATGTCGTC AGCATTTACC GGACCCAGGG CAGCGAGCCT
GCATTTGCGA AAATCCAGGA AGGCGAAGGG ATCAGGCTCA ACCAGCTGCT CACGGCCAAG
ATCGACCAGA TCGAAGATTA CGAAAACCAC AACCTGGACC AGCGCCGGAA GCTCGTTTCG
GACACGCAGC AGAATTCCAT CCTGTTTATC CTGCTCACCG GGGCGGTCGG CTTCATCCTC
ACCATCCTCT CGATCATCTT CCTGAACCTC GACAAGCGCA AGCAGCGGCT GCTTCAAAAT
GAAATCAAGG AAAGGGAACG GACGGTGAGC CAGTACCTGG AAGCCATTCC CGACGGTGTG
ATGGTGATCA ATAGCGAACG GAAAATTGAA CTGATCAACG AATCGGGGCG GGAAATCCTG
GGCGTGGACG GCGAGCGGCC CGCGACGCTC GAAGAGCAGG TGACGCGCAT CAAACTCCTC
GATCCGACAC GGTACCACGT CCGCTTCTCG GCCGACACCC TACCCGTTGC GCGGGCATTG
CAAGGCGAAA AACTCACCGG CAACAAGATC GACCTGGTGA AAAACGATAA GATTTATCAC
CTCGAAACCA GCGTGCAGCC GGTGATCGGG CTCGACGGCC GGATCAAGAG CGCGATTACC
GTTTTCAGGG ACATTACCGA GCGGGCCAAC TACGAGGCGA CGCTGGAAAA AGCACGGAGC
CTGGCCGAGA AATCCGTGCG GGTGAAGGAC ATTTTCCTTT CCAATGTGAG CCACGAGATC
CGGACGCCGC TCAATGCGAT CATCGGGTTC ACCAACCTGC TTATGGGAGA AGTGACCGAC
CAGAAAAGCC AGGAATATGT CGGTTACATT CAGTACGCGG GCAAAAACCT GCTCGAACTG
ATCAACGACA TTCTCGACTT TTCCAAAATC GAAGCCGGGC AGGTCCATCT CGAAAAAGCG
CCCGTATCCA TCCGCGAGCT GGCCGACGAG ATTTCGGCGA TCATGCACCA CCGCGCCGTC
GAAAAAGGCA TTGTTTACGA AGCGCTGCTG GCCGACGGAT TGCCCGAATT TATCGAAACA
GACAAATTGC GGCTAACGCA GATATTGCTC AATGTGTGCG GCAATGCGGT GAAATTCACG
GAGAAAGGCA GCGTAAAACT CCGCGTAGCA CCGATCGGCG AGCCGCTGAA CGACGTCCAG
AACATCCGTT TCGAGGTGAA AGACACGGGT GTGGGTATTC CAAAAGACAA ACTCAAAGAG
GTGTTTAACC GCTTCGTGCA GGCCACTGAA AGCACTACGC GGGTATTCGG CGGCACGGGC
CTTGGACTGA GCATCGTAAA ATCGCTTGTT CAGCTATTCG AAGGCACATT GAACCTCGAA
AGCGAGCTGG GGCAGGGAAC CGTGTTTACC ATGGACTTCC CTTTCAGGAT CGTGAACGAC
GCCGGGCTGC ATGACGACAT TGAGAAAGAA ATTGACATTA CCGCATCTGT AACCTCACTG
CGCATTCTCG CGGCAGAAGA CAATACATTG AACCAGAAGC TGCTGAAAGC GATTTTCGAA
CGGCTGAATA TCCCGCTGAC GATCGTGAAC AACGGCCAGG AAGCGCTCGA CCGGCTTCGG
GAGGAAACAT TCGACCTCGT TTTGATGGAC ATTCAAATGC CCGTCATGGA CGGCTACACG
GCCATCAAGG AAATCCGCCG CACGGTTTCG AGCACCATTC CGATCATCAC CATGACCGCC
CACGCGATGG TCGGAGAGAA AGAAGAATGC CTGAGTATCG GCGCCAACAG CTATATTTCG
AAACCTTTTA AGGAAAGTGA ACTTTTATAT ACCATTGCAC ATCTTGGAAA CAAAGAGAAT
TACGAAGCAC AACCCAAAGA ATTTACTCAA CAACCCTCCC CTGCTAAAAT GACAGACACG
ATCCTGAATC TCGACTACCT CACCGAAATT ACCGGCGGCG ACCAGGAATT GCGCGACGAG
CTGATCGCCC TTTTCGAAAA AGACAGCAAA ATTCAACTGA TGAACATTGC CGACGCGTCA
CTGGCCAACG ACCTCGAAAA GCTGCGCCAG GCCATTCACA AATTCCGATC TTCACTGTTT
TCCGTGGGAT TGCTCAATAC CGCCAATCAA TACAAGGAGC TGGAAGCTAC CCTGAAACAA
GGCAACTGGA ACAGCGGCCT TAACCAGAAG CTGGTGGAAT TGAAAGCTGA ATCGGAAACG
GGATTATCGC AGCTGAAAAA CCTGTAA
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| Protein sequence | MPTRLTTDSF RWYYASIYLG LALIFGSQYF TYKNVRDLSL NNERLNVTIG VLNQTANFGL
VTKDFQSNMR GYLITQDNEL LSDNYNKKIQ LVSITDTLFN LVKTDETQTR RVKELLSISS
QIVAYTQNVV SIYRTQGSEP AFAKIQEGEG IRLNQLLTAK IDQIEDYENH NLDQRRKLVS
DTQQNSILFI LLTGAVGFIL TILSIIFLNL DKRKQRLLQN EIKERERTVS QYLEAIPDGV
MVINSERKIE LINESGREIL GVDGERPATL EEQVTRIKLL DPTRYHVRFS ADTLPVARAL
QGEKLTGNKI DLVKNDKIYH LETSVQPVIG LDGRIKSAIT VFRDITERAN YEATLEKARS
LAEKSVRVKD IFLSNVSHEI RTPLNAIIGF TNLLMGEVTD QKSQEYVGYI QYAGKNLLEL
INDILDFSKI EAGQVHLEKA PVSIRELADE ISAIMHHRAV EKGIVYEALL ADGLPEFIET
DKLRLTQILL NVCGNAVKFT EKGSVKLRVA PIGEPLNDVQ NIRFEVKDTG VGIPKDKLKE
VFNRFVQATE STTRVFGGTG LGLSIVKSLV QLFEGTLNLE SELGQGTVFT MDFPFRIVND
AGLHDDIEKE IDITASVTSL RILAAEDNTL NQKLLKAIFE RLNIPLTIVN NGQEALDRLR
EETFDLVLMD IQMPVMDGYT AIKEIRRTVS STIPIITMTA HAMVGEKEEC LSIGANSYIS
KPFKESELLY TIAHLGNKEN YEAQPKEFTQ QPSPAKMTDT ILNLDYLTEI TGGDQELRDE
LIALFEKDSK IQLMNIADAS LANDLEKLRQ AIHKFRSSLF SVGLLNTANQ YKELEATLKQ
GNWNSGLNQK LVELKAESET GLSQLKNL
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