Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0152 |
Symbol | |
ID | 8223718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 171074 |
End bp | 174415 |
Gene Length | 3342 bp |
Protein Length | 1113 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644928031 |
Product | trehalose synthase |
Protein accession | YP_003084588 |
Protein GI | 255033967 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.38856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATACA GGAAAGGAAT GCCCGACAAA AATTTGCATT GGTACAAGGA TGCAATCATT TACGAACTTC ATATCAAAGC CTTCAAAGAC GGAAATTGCG ATGGGATAGG CGATTTCAAG GGACTACTGG AACAGCTGGA TTATCTGCAA GACCTGGGCG TAACGGCCAT CTGGCTGCTG CCCTTCTACC CTTCCCCGCT GCGCGACGAC GGCTACGACA TTGCTGATTA TTACACGATT AACCCGTCGT ACGGCGACAT TCAGGAATTC AAAACGTTTC TGCGCGAAGC GCATAAGCGC GGCCTGAAAG TGATTACCGA ACTGGTGATC AACCACACTT CCGACCAGCA CCCATGGTTC CAGCGTGCGC GCCGCGCGCC CAAGGGCTCG GCGTATCGGA ATTTTTATGT GTGGACGGAT GATCCGCATC AGTTCAAAGA CGCCCGCATT ATTTTCCAGG ACTATGAAAA ATCGAACTGG ACGTGGGACA ACGAGGCCGA GCAATACTAC TGGCACCGGT TCTTCCACCA CCAGCCCGAT TTGAACTACG ACAGTATGGA TGTACAGGAA GAGATCTTCA AAATCATCAA TTTCTGGTGT AAAATGGGTG TCGATGGGTT CAGGTTGGAT GCTGTGCCTT ACCTTTTCGA GCGCGACGGG ACCAACTGCG AGAATCTGCC CGAAACGCAT GCATTCCTGA AAAAACTGAG AAAGTACGTC GATGACCGCT ATCCCGGCAC ATTGCTTCTG GCAGAGGCCA ACATGTGGCC CGAGGACTCC GCGGCGTATT TCGGGGACGG CGACGAATGC CAGATGAATT ACCATTTCCC GATCATGCCG CGGATGTTTA TGTCGCTGCA AATGGAGGAC CGCTATCCGC TTACCGACAT TTTCGACCAG ACGCCCGCCA TACCGGACAA CTGCCAGTGG GGTATTTTCC TTCGGAACCA CGATGAGCTG ACGCTTGAAA TGGTTACTGA CGAGGAGCGC GACTATATGT ATAAGACGTA TGTCAAAGAT CCGAAGGCGC GCATTAACCT CGGGATCAGG CACCGCCTGG CGCCGCTGAT GGAGAACAAC CGTAAAAAAA TCGAGTTGCT GAACTCCCTG CTCTTCACAT TCCCCGGTAC ACCGATCATT TATTACGGCG ATGAAATCGG GATGGGCGAT AATTTTTACC TCGGCGACCG CGACGGCGTG CGCACCCCCA TGCAATGGAG CCCCGACCGG AACGCCGGGT TTTCGCAAGC CAACCCGCAA CGCCTGTACC TGCCGCTGAT CCTCGATCCG CAGTACCATT ACGAGTCTGT GAATGTGGAA TTGCAGTCGC GCAATTCCTC GTCGCTGCTG TGGTGGATGC GCCGGGCGAT CAGCACGCGC AAAAAATACA AGGCATTCAG CCGCGGCGAC ATTAAGTTTT TAAACCATGA AAACGCGAAG GTGCTTGCAT TTACGCGCAG CTTTGAGGAC GAAACGATGC TGGTCATCGC CAATTTGTCG AGGTTCCCGC AACCTGTGGA GCTCGATCTG GATCAATATA AAGGGTTTCA GCCGGTGGAA ATTTATAGTA AAAACAAATT CCCGTCGGTG AAGGACAACA CACCCTACTT TTTCACATTG GAAGCGTACG GCTGCCAATG CTTCCTGATG CAGAAAACGC ATCCCGAGAT CGACGACAAC CGTGAGCTAC CATTGGTGAA ACTCGATAAA TGGAAAGATC TTTTGGAACC GAATATGCTG GAAAAACTGG AAACGCAAAT TCTTCCGGCC TATCTGATGA AAATGAGATG GTTCGGAGGA AAAGGCAAAG GCCTCGACAA AGTGAGCATC GTTTCCCACG CCAGCATTCC ATTGGGCGAT AACCCGCCGT GCTTCCTGCT TTTGATCGAA ACAACTTACC AAAACGACCT GCCGGAAATG TACCAGCTGC CGGTGGCATT CGGCAAGGAG CCGTTCGCAT TCAACGTCCG CGAAAACTGC CCGCAGGCCG TGCTGGCGCG CATTCAGATC AAGGGTGAAG AGGAAGGGGT ATTGTTTGAT GCGATTTACG GACTTGAATT GCAACAGGCG CTCATTCAGA ACATGGCAGC CAACGAACGG TTGAATGCTA AAAACAGCCA GATTCATTTT ACGGGCAACC GGGAACTGGC GCAGCATATC AAGGAAACTG ACCGCATCAA ACCGCGTGTG CTTTCAGGAG AGCAGAGCAA TACTTCCATT ACTTATGATG GAAAGTATTT CTTCAAACTC TATCGCAAAG TCGACCGGGC CATTAACCCC GACGTCGAGA TCACGCAATA CCTTACCAAT AAGGCCCGCT TCAAAAACAT CCCGGCTTAC ATCGGCGCCA TTGAATGGAA GTACAAAAAG GATTCAATGG TGCTGGGCAT GATGCAGGAA ATGGTGAGCA ATGCCACCGA CGCCTGGGCC AACATGCTCG ACAGACTGGA TAGCTTCAAC GAAAAAGTGC TGTCCACAAC AGACCTCGAG CTGCCTACCG AGCTGGTCGG AACGCTCACC GATCCTGTGG GTTATGAAGA CATTCCAGAC ATTATGAAGG AATTGCTGGA TGTGCATGTG GCTGAACAAG CGAGGCTGCT GGGTGAGCGT ACGGCGCAAA TGCACCTGGC CCTCGCAGGA GAAAAAGAAA ACCCGGATTT CAAACCGGAG GAGTTTTCGT TGCATTACCA GCGGTCGGTG TACTCATCGC TGCAATCCCT GGTCCGTGCC ACATTCCAAA GCCTCAACCG AAACATGAAG AAACTGACGC CGGAAATGCG CCAGGCGGCC GAGGAAACCA TGCAGTTGCG GGATGAAATA CTAACCGAGC TCAAAAAAGT ATACAGCCAC AAAATCGATA CGGCCAAAAT CCGTATCCAT GGCGACTACC ACCTGGGCCA GGTGCTGTTT ACCGGAAAAG ACTTCGTCCT GCTCGATTTC GAAGGAGAAC CCGCCCGCAG TTACAGCGAG CGGCGATTGA AACGCTCGGC GCTACGCGAC GTGGCAGGTA TGCTGCGGTC GTTCCACTAT GCGGCTCACA GCAGCCTTTA CCTGGATAAC CAGATCAGGC CGGAAGACGC GGGCAAATTG CTGCCGTTTG TGGAACAATG GTATCACTAT ATGAGCGGCT TTTTCCTGAA AGCATACCTG GAAACGGTGG GCAATGGCGC GATCATCCCG CACCAGAAAG GCGATCTCGA AATACTTTTG AGGACATTCC TGCTGCAAAA GGCGATTTAC GAGCTCAATT ACGAAGTAAA CAACAGACCA TCCTGGGTAA TGGTGCCTTT GAGGGGCATC CGGGCCATTC TGGACAAATC GGAGGCGGCT GTGGTGGCTT AA
|
Protein sequence | MEYRKGMPDK NLHWYKDAII YELHIKAFKD GNCDGIGDFK GLLEQLDYLQ DLGVTAIWLL PFYPSPLRDD GYDIADYYTI NPSYGDIQEF KTFLREAHKR GLKVITELVI NHTSDQHPWF QRARRAPKGS AYRNFYVWTD DPHQFKDARI IFQDYEKSNW TWDNEAEQYY WHRFFHHQPD LNYDSMDVQE EIFKIINFWC KMGVDGFRLD AVPYLFERDG TNCENLPETH AFLKKLRKYV DDRYPGTLLL AEANMWPEDS AAYFGDGDEC QMNYHFPIMP RMFMSLQMED RYPLTDIFDQ TPAIPDNCQW GIFLRNHDEL TLEMVTDEER DYMYKTYVKD PKARINLGIR HRLAPLMENN RKKIELLNSL LFTFPGTPII YYGDEIGMGD NFYLGDRDGV RTPMQWSPDR NAGFSQANPQ RLYLPLILDP QYHYESVNVE LQSRNSSSLL WWMRRAISTR KKYKAFSRGD IKFLNHENAK VLAFTRSFED ETMLVIANLS RFPQPVELDL DQYKGFQPVE IYSKNKFPSV KDNTPYFFTL EAYGCQCFLM QKTHPEIDDN RELPLVKLDK WKDLLEPNML EKLETQILPA YLMKMRWFGG KGKGLDKVSI VSHASIPLGD NPPCFLLLIE TTYQNDLPEM YQLPVAFGKE PFAFNVRENC PQAVLARIQI KGEEEGVLFD AIYGLELQQA LIQNMAANER LNAKNSQIHF TGNRELAQHI KETDRIKPRV LSGEQSNTSI TYDGKYFFKL YRKVDRAINP DVEITQYLTN KARFKNIPAY IGAIEWKYKK DSMVLGMMQE MVSNATDAWA NMLDRLDSFN EKVLSTTDLE LPTELVGTLT DPVGYEDIPD IMKELLDVHV AEQARLLGER TAQMHLALAG EKENPDFKPE EFSLHYQRSV YSSLQSLVRA TFQSLNRNMK KLTPEMRQAA EETMQLRDEI LTELKKVYSH KIDTAKIRIH GDYHLGQVLF TGKDFVLLDF EGEPARSYSE RRLKRSALRD VAGMLRSFHY AAHSSLYLDN QIRPEDAGKL LPFVEQWYHY MSGFFLKAYL ETVGNGAIIP HQKGDLEILL RTFLLQKAIY ELNYEVNNRP SWVMVPLRGI RAILDKSEAA VVA
|
| |