Gene Dfer_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0146 
Symbol 
ID8223712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp162501 
End bp163286 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content57% 
IMG OID644928025 
Producthypothetical protein 
Protein accessionYP_003084582 
Protein GI255033961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.445044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG ATCTTGTCAG CCTGCGGACC GTCAACGTGC TGCGTTATCT GACACCCCTG 
CGCGAGGGCG GCTCTCTTCC CGCCATTGCC GAGGCCGATG ACGATTTTTT GTATGTATTA
AAATTCAGGG GCGCAGGGCA GGGTACCAAA GCATTGATTT CGGAGCTGAT AGGAGGGGAA
TTGGCGCGGT TTCTGGGGTT GAAAGTACCT GAAATCGTGT TCGCTAATCT GGATGAGGGC
TTTGGCCGGA CTGAACCCGA CGAGGAGATC CAGGACCTGC TCAAAGCCAG CACCGGCCTT
AACCTGGCGA TGCATTACCT GTCAGGCGCC ATTACTTTCG ATCCCGTTGT GACGAAGGTG
CCGCCTCGGC TCGCTTCCGA GATCGTGTGG CTGGACAGCT TTCTTACCAA TGTAGACCGT
ACGGCCCGCA ACACCAACAT GCTGATGTGG CACAAAGAGC TCTGGCTGAT CGACCACGGC
GCGGCGCTCT ACTTCCACCA TTCGTGGGAT AACTGGCAGG AACAGGCCAA ACGGCCTTTC
GCGCAGGTGA AGGACCACGT GTTGCTGAAA AGTGCGACCA TGCTGGAAGA AGTAAATGCC
GAATTCCGCG AGCGGCTTGC GGGTGGCATT ATCCCGGCGG TGGTATCCCT CATTCCCGAC
GACTGGTTGC TTCGCGACGC GCCTTTTGAA ACGGCCGACG AGCACAGGCA GGCTTACGTG
TCATACCTGA AAGCCCGCCT GTCGGCATCC GAAACATTTG TGAAAGGAGC GCAGGATGTC
AGATAA
 
Protein sequence
MDNDLVSLRT VNVLRYLTPL REGGSLPAIA EADDDFLYVL KFRGAGQGTK ALISELIGGE 
LARFLGLKVP EIVFANLDEG FGRTEPDEEI QDLLKASTGL NLAMHYLSGA ITFDPVVTKV
PPRLASEIVW LDSFLTNVDR TARNTNMLMW HKELWLIDHG AALYFHHSWD NWQEQAKRPF
AQVKDHVLLK SATMLEEVNA EFRERLAGGI IPAVVSLIPD DWLLRDAPFE TADEHRQAYV
SYLKARLSAS ETFVKGAQDV R