Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0068 |
Symbol | |
ID | 8223634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 84366 |
End bp | 86147 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644927947 |
Product | ABC transporter related |
Protein accession | YP_003084504 |
Protein GI | 255033883 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.588647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC CTTATTTATC CCTGCTCGCC ACCGCGTGGC GCTATGCCCG CCAGCAGCGG GGCCGGTACC TGCTCGTGTA CGGCATGTTT GTATTGGCCA ACCTGGTGCT GGCCGCGCAC CCGCTATTAT ATGGATGGTT TATCCAGTCT ACCCAGCAGG ATGCCGAGGA AACGTTACGC AACGTGTGGT GGTACGCGGG CGCCTACCTC GGCCTCACCC TGCTCGAATG GGCTTTCCAC GGCCCCGCGC GCGTGATGGA GCGCAAGCTG GCATTCGACC TCAGCCGCAA TTTCCTCGAC GAACTGTATC ACCAGGCATT GCATTTACCG ATCCGCTGGC ATCAGGACCA CCACAGCGGC GCGACGATCA ACCGCATCCG CAAGGCCTAC GAAGCCCTGA AAGACTTCTT TCAGAACGGC TTCATGTTCC TGCACGCATT TGCCAAATTC ATATTCTCAT TCATTGCGAT CATCTGGTTT TCGCCGCTGT TTGGCGCGGT GGGCGTACTG ATCGGCGTCA TTAATGTGTA TGTGATATTC AAATTCGACA AACCGTTCAT TAAAGCGCTC GACGAATCGA ACGAGAAGGA GCACGTTGTA TCCTCCACGT TGTTCGATAG CCTTTCCAAT ATTATCACCG TGATCACCTT ACGACTTGAA AAGCGGATGA AAGTGAGCCT GATGGGCAAA GTAGCCGACG TATTCCCGCC ATTCCGGCGC TCGGTGGTGA TCAACGAATG GAAATGGTTT GTGGCGAGCG TGTTCATTGC GGTCATTTAC ATTGTGGTGA CGGTCGGCTA TGTGTACCAG CATTATGTGC CGGGCGAGGT ATTTCTCGTG GGCGGGCTGG TGACGCTGCT CAGCTACGTC AACCAGTTTA CAAGCGTATT CCAGGACATC GCCTGGCAAT ACACGGAAAT CATCCGCTAC AATACGGAAG TACAAACCGC CCGCGCGATA GGCGACGCTT ACCGCGTGCA CCACCGCCTG GACGAAGTCG GCGAACTCCC CGAAAACTGG CGCGAGATCC ACATCAGCAA CCTTAACTTC TCACACGGCG AGGTGTACGA CGCCAAAAAG CAGGCACACA GCCTCCACGG CCTCGACATC CGCATCCGCC GCGGCGAGCG CATTGCCTTC ATCGGGGAAA GCGGCAGCGG GAAAAGCACA CTCCTGGCGC TGCTGCGCGG ACTGTACCAG CCTGAAAACG ACGTAAAAGT GACGATCGAC GGCCAGCAGG AAGCCGGCAT CGAGATGCTC GCCGACCAGG TGACGCTCTT CCCGCAAGAC CCCGAGATAT TCGAGAACAC CATTGCCTAC AACATCACGC TCGGCCTGCC GTTCGACGAA CAGGACATTA TGCAAGTGTG CGAAACGGCG CATTTCGAAG ATGTGGTCGG CAAGCTGCCG AACGGCCTGG AATCAAACAT CCAGGAGAAA GGCGTGAACC TCTCCGGCGG CCAAAAGCAG CGCCTCGCAC TCGCAAGAGG CATCCTCGCC GCACGCACGA GCGACATCGT GCTGCTCGAC GAGCCGACGA GCAGCATTGA CCCGAAGACG GAGGCGATGA TTTATGACAG GATGTTTGTG GAGTTTTCGG ACAAAGCGGT GATATCTACA CTACACCGTT TGCATTTGCT TGCGAAGTTT GATTACACAT ATATACTGCA AGATGGTTAC ATTGCGGATG AAGGTTCATT TGCACAATTA CGACGAAACA GTCCGCTCTT CAACGAGCTT TGGCGACATC AGGAGCTGCT GGCCCGCCAC AATTTCGACT AG
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Protein sequence | MKNPYLSLLA TAWRYARQQR GRYLLVYGMF VLANLVLAAH PLLYGWFIQS TQQDAEETLR NVWWYAGAYL GLTLLEWAFH GPARVMERKL AFDLSRNFLD ELYHQALHLP IRWHQDHHSG ATINRIRKAY EALKDFFQNG FMFLHAFAKF IFSFIAIIWF SPLFGAVGVL IGVINVYVIF KFDKPFIKAL DESNEKEHVV SSTLFDSLSN IITVITLRLE KRMKVSLMGK VADVFPPFRR SVVINEWKWF VASVFIAVIY IVVTVGYVYQ HYVPGEVFLV GGLVTLLSYV NQFTSVFQDI AWQYTEIIRY NTEVQTARAI GDAYRVHHRL DEVGELPENW REIHISNLNF SHGEVYDAKK QAHSLHGLDI RIRRGERIAF IGESGSGKST LLALLRGLYQ PENDVKVTID GQQEAGIEML ADQVTLFPQD PEIFENTIAY NITLGLPFDE QDIMQVCETA HFEDVVGKLP NGLESNIQEK GVNLSGGQKQ RLALARGILA ARTSDIVLLD EPTSSIDPKT EAMIYDRMFV EFSDKAVIST LHRLHLLAKF DYTYILQDGY IADEGSFAQL RRNSPLFNEL WRHQELLARH NFD
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