| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0041 |
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| Symbol | |
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| ID | 8223607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 45947 |
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| End bp | 47083 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644927921 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003084478 |
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| Protein GI | 255033857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.89791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.261432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAA ATACAACAAA ATATTACTCC GCTGCCCTGC TTGCATTGAC GATCTTCTCC
TGCGGCAAAA AAGATCAGCA GCAACAGCCA ACCGGCCCGA TGGCCGTTCC GGTGACTTTG
ACGGAAGTTA AATCCTCGGA AGCATCCTAC TACGACGAAT ACCCCGGAAC TGTGGTGCCG
CTGAACGAGG TGGAACTGCG CCCGCAGGTA ACCGGCTTTG TAACCGGCAT TCATTTTACG
GATGGCGCCC GCGTACGCAA AGGCCAGCTG CTCTACACGA TCGACGCACA GCTTTACGAC
GCCAACTACG ACCAGGCCGT GGCCAACCTG AATGTACAGG AAGCTAACCT CGCCCGCGCC
CAGAAAGACG CCGACCGTTA CCATGAACTC GAAAAAAATG ACGCCGTTGC GAAACAGCTG
GTAGACAATG CCGATGCGGC ACTGGAAGTG GCCAAACGGC AGGTGGACGC CGCCAAAGCG
AGCATTAAGG CTTCGCAAAC GAGTGTGCGC TATACCAAGG TAATGGCCCC ATTCGATGGT
ATTATCGGCA TTTCTGCCGT AAAAGTCGGC GCGCCCGTTT CGGCAGGACA AACGATCCTC
AATACCGTTT CGACCGACAG CCAGCTTGCC GTCGATTTCA ATGTGGATCA GAAAGAGATT
TACCGCTTTA CCACATTGAT GAAGTCGCAA AAAGCGAGCG ACTCGACATT CTCGCTCAAA
TTCGGAACCG ACATTTATCC CGCGCACGGC AAAATCGCCC TGCTCGACCG AGCCGTGGAC
CCGCAAACAG GTAGCATCAA GGCGCGTCTC GTTTTCCCCA ATAAGGACAA TCAGCTTCGT
GCAGGCATGA GCGGAACCGT GCGTGTACTG AACAATGCCG GCTCGAAATC GCTCGTGATC
CCTTACAAAG CGGTTACCGA GCAGCTGGGC GAATTCTTCG TGTACGTGGC GGGCGACAGC
AGCAAGGTTA CCCAACGCAA AGTGGTGCTC GGAACTGCCA TCGGCCCGAA CATTATTATC
CGCGAGGGCT TGCAGGAAGG CGAGAAAATC GCGGTGGAAG GAGTTCAGAA CCTTCGTGAA
GGAGCAGTGA TTCAGGAAGG CGCGCCTGCT CAGGGCGGCG CTCCCAAGAA GCAATAA
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| Protein sequence | MFLNTTKYYS AALLALTIFS CGKKDQQQQP TGPMAVPVTL TEVKSSEASY YDEYPGTVVP
LNEVELRPQV TGFVTGIHFT DGARVRKGQL LYTIDAQLYD ANYDQAVANL NVQEANLARA
QKDADRYHEL EKNDAVAKQL VDNADAALEV AKRQVDAAKA SIKASQTSVR YTKVMAPFDG
IIGISAVKVG APVSAGQTIL NTVSTDSQLA VDFNVDQKEI YRFTTLMKSQ KASDSTFSLK
FGTDIYPAHG KIALLDRAVD PQTGSIKARL VFPNKDNQLR AGMSGTVRVL NNAGSKSLVI
PYKAVTEQLG EFFVYVAGDS SKVTQRKVVL GTAIGPNIII REGLQEGEKI AVEGVQNLRE
GAVIQEGAPA QGGAPKKQ
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