| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1365 |
|---|
| Symbol | |
|---|
| ID | 5131220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1320868 |
|---|
| End bp | 1321809 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640530300 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001214820 |
|---|
| Protein GI | 147670002 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATGCTA TACTTTGCCA AAAGCTGACC AAGAAATTCG GTGATTTTAC CGCCCTGGAC
GGATTGGATC TTGCAGTTGA GAAAAACCGG GTTTTCGGTT TTTTAGGCCC GAACGGGGCA
GGCAAGACTA CCGCTGTCCG AATGCTTACC GGGCTTTCCC AACCTACTTC CGGCAAGGCC
TATGTATCCG GAGAAGAAGT AACACCCCGA AACCTGTCAC TCCGATCCAA GATTGGTTTT
CTGCCGGACG TACCTGCTTT TTACGGCTGG ATGACGGGAC GTGAATTTAT GCTTTTTTCA
GGCGAACTCC ACAAATTATC CCCCAGAGAA AATAACCTGC GGGCAGATGA ATTGCTGGAG
CTGGTAGACC TTAGCGAAGC CGGCAAACGC CGGGTTGGAG GGTACTCACG GGGCATGAAA
CAGCGCCTGG GTATTGCCCA AGCACTGGTA AATAAACCTG AAGTGCTTTT TATGGACGAA
CCCACCTCGG CCCTTGACCC TATGGGGCGG AGGGATGTAC TGAACCTTAT AGAGCGCTTA
AGCGGGGATA CCACCGTTTT CATGTCCACC CATATACTTT CAGATGTGGA AAGAGTATGT
GACCGGGTAG CTATCATAAA CGAAGGCAAG CTGATAACCT CCGCTAGTGT GGAGGAACTT
AAACGCAAAT ACTCCACTTC GGCCTTTGAA ATCCAGTTTG AAGAAGAACC TACCCCCATT
CTCACCCAGC TTTTAAAAAT GCCTTACATA AAAACAGCCG AGGTGCGAAC CGAAGGTGAG
GTCAGAGTAC TATATGTACA GGCCAGTGAC CTTGCCAAAG CCAAAACCGA AATACCCGGG
GTGATTGCCC AAAGCGGACT GACCCTGACC CATTATGAAC TTACTACCCC CAGTATAGAA
GATGTATTTA TCCAGCTTGT AGGGAATGGT GCAAAGGCAT GA
|
|---|
| Protein sequence | MDAILCQKLT KKFGDFTALD GLDLAVEKNR VFGFLGPNGA GKTTAVRMLT GLSQPTSGKA
YVSGEEVTPR NLSLRSKIGF LPDVPAFYGW MTGREFMLFS GELHKLSPRE NNLRADELLE
LVDLSEAGKR RVGGYSRGMK QRLGIAQALV NKPEVLFMDE PTSALDPMGR RDVLNLIERL
SGDTTVFMST HILSDVERVC DRVAIINEGK LITSASVEEL KRKYSTSAFE IQFEEEPTPI
LTQLLKMPYI KTAEVRTEGE VRVLYVQASD LAKAKTEIPG VIAQSGLTLT HYELTTPSIE
DVFIQLVGNG AKA
|
|---|
| |