Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1350 |
Symbol | |
ID | 5131210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1310085 |
End bp | 1310612 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530285 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_001214805 |
Protein GI | 147669987 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA TATATTTGGG ACTGGGGTCA AACACCGGAA CCCGTGAACA ATACCTGAAA GATGCCCAGA CCCGTCTTTC AGAAAAAATC GTTATCACCA GCTGTTCCAC TATATATGAA ACCGAACCGC TGAACTGCCC TCCCCAGACG AACTTTTTAA ATATGGTTAT AGAAGCCCGC ACAGAGCTTT CACCTCCGGA CCTTTTGGCA TTTACCCAAA AGGTGGAAAA AGAGATGGGC CGAAGCCAAA ACAGCCATAA CCAGCCCCGC CTAATAGATA TTGATATCCT GCTGTACGGC CAAAAACGCT TAAATACGCC CACCCTGACC ATACCTCATC CCCACTTGAC CGAAAGGGCT TTTGTAATGT TACCGCTGGT GGAACTGGCA GCTGATTTTA TCTACCCGGG CAGCCGCTCC AGCCTGTCGG ATTTGCTTGA GGAACTGCCT TCCGGCCAGT CTATCCGTCC GTTTTCATAC CTGCCTGAGG ACAGCAGAGA CGATTATGAC GACGACGAGG ACGAATAA
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Protein sequence | MEIIYLGLGS NTGTREQYLK DAQTRLSEKI VITSCSTIYE TEPLNCPPQT NFLNMVIEAR TELSPPDLLA FTQKVEKEMG RSQNSHNQPR LIDIDILLYG QKRLNTPTLT IPHPHLTERA FVMLPLVELA ADFIYPGSRS SLSDLLEELP SGQSIRPFSY LPEDSRDDYD DDEDE
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