| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1292 |
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| Symbol | |
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| ID | 5132303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1262296 |
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| End bp | 1263693 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530226 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001214749 |
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| Protein GI | 147669931 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.674052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGC CAGATTTGCC CAAGAGACAG ATAAGTCAGG AAGCCGTATT GGTGGTTACG
ACCTTAAGTG CCTTCCTGAC TCCTTTTATT TCATCATCTA TAAATATCGC TTTGCCCTCC
ATGGGCAAAG AATTCGGTAT TGATGCCGTC CACCTTAGCT GGATAGCCAC CGCCTTTATT
CTGGCGGCAG TGGTCTGTCT GGTGCCTTTC GGAAGGCTGG CGGATATCTA CGGACGCAAA
CGTATATTGA CTATCGGCAT CATTATTTAT ACTCTGGCTT CAATTTCCTC TGCACTTTCT
CCCAATGAAG GCTGGCTGAT ATTCAGCCGG ATTATTCAGG GTGTGGGCGG TGCCGGTATA
TTCGGTACTT CTGCTCCCAT TCTCATTTCG GCTTTTCCTC CCGGTATGCG GGGACGGGTG
CTGGGGATAA ATGTAGCGGC AGTATATATA GGTTTGTCTG CCGGGCCTTT TCTGGGGGGC
TTTCTTACCC AAAACTTTGG CTGGAGAAGT ATTTTCTGGT CAAATGTGCC TTTGGGTTTG
CTGGTTATCG GGTTTATTTT CTGGAAGATG CGCGGCTGGG ATATGGCCGA ATCCAAGGGC
GAAAAATTTG ATTATCTGGG TTCACTGGTA TATGGGCTTG GGGTGGTGGC GGCTATGGCC
GGCACTACCA TTTTGCCTGA CCCGACTGCA GTCTGGTATA TACTGGCAGG CCTTATAGCT
TTCAGCGTGT TTATTTGGCG GGAACTGAAT TTCACCAGCC CTATTTTTGA TGTGCGTTTG
TTTAAACGTA ACCGTCCGTT TATCTTGTCC AATCTGGCGG CTCTTATAAA TTACAGTGCT
ACTTTCGGGG TGGGCTTTTT GATGAGCCTG TATTTACAGT ATATAAAAGG TTTCAGTCCC
CAATCTGCCG GGTTGGTACT GGTGGCTATG CCCATTGTTC AGGCTTGTCT GTCGCCTTTT
GCCGGCAGGC TTTCAGACCG CATTCAACCG CGTTTTGTGG CTACTGCCGG TATGGGCTTA
ACTACTATCG GGCTGGCCCT CTTGTCAACC CTGAGCACGG ACACTCCGCT GGTATTTATA
ATAACTGCAT TGATATTACT GGGGTTGGGC TTTGCCCTGT TTTCTTCTCC AAATACCAAT
GCGGTTATGA GTTCGGTTGA GAGAAAACAC TACGGGGTGG CCTCAGGAAC GCTTTCCACC
ATGCGTCTTT CCGGCCAGAT GATAAGCTTG GCGGTGGTTA TGTTCCTGTT TTCCCTGATA
CTGGGGCCGG TTCAGATTGG TCCGGAGAAT TATGAAGGTT TTCTGACCAG CATGCGTACC
GCTATGATAC TTTTTACTAC GCTGTGTTTT CTGGGTATCT TTGCGTCCCT GTCCAGAGGA
AATACCCGCA AGGCCTGA
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| Protein sequence | MTQPDLPKRQ ISQEAVLVVT TLSAFLTPFI SSSINIALPS MGKEFGIDAV HLSWIATAFI
LAAVVCLVPF GRLADIYGRK RILTIGIIIY TLASISSALS PNEGWLIFSR IIQGVGGAGI
FGTSAPILIS AFPPGMRGRV LGINVAAVYI GLSAGPFLGG FLTQNFGWRS IFWSNVPLGL
LVIGFIFWKM RGWDMAESKG EKFDYLGSLV YGLGVVAAMA GTTILPDPTA VWYILAGLIA
FSVFIWRELN FTSPIFDVRL FKRNRPFILS NLAALINYSA TFGVGFLMSL YLQYIKGFSP
QSAGLVLVAM PIVQACLSPF AGRLSDRIQP RFVATAGMGL TTIGLALLST LSTDTPLVFI
ITALILLGLG FALFSSPNTN AVMSSVERKH YGVASGTLST MRLSGQMISL AVVMFLFSLI
LGPVQIGPEN YEGFLTSMRT AMILFTTLCF LGIFASLSRG NTRKA
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