Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1235 |
Symbol | |
ID | 5132101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1215908 |
End bp | 1216204 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530161 |
Product | chaperonin Cpn10 |
Protein accession | YP_001214692 |
Protein GI | 147669874 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0234] Co-chaperonin GroES (HSP10) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000309025 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATTA GATTCGAACC CCTGCACAAC ATGGTACTCA TCCAGCCCCA GGAAAAACAG GATATGAGCA AAGGCGGTAT CATCATACCT GACGCTGCTC AGGAAAAATC CCAGGAAGGC GTGATTGTAG CTGTGGGCCC CGGCCGTCTG GATAAAGATG GCAAGCGCGA AACCATGAGC ATCAAAGTTG GAGAGAAGGT TCTTTTCCCC AAATTCGGTG GTGTTGAACT TAAATCTGGC GGCGTGGAAT ATATCATCAT GCCCGAGAGC CAGATTATGG CTAAAATCGT AGGCTAA
|
Protein sequence | MAIRFEPLHN MVLIQPQEKQ DMSKGGIIIP DAAQEKSQEG VIVAVGPGRL DKDGKRETMS IKVGEKVLFP KFGGVELKSG GVEYIIMPES QIMAKIVG
|
| |