| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1216 |
|---|
| Symbol | |
|---|
| ID | 5131508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 1194992 |
|---|
| End bp | 1195642 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640530142 |
|---|
| Product | putative translaldolase |
|---|
| Protein accession | YP_001214673 |
|---|
| Protein GI | 147669855 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000404996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT TTCTGGATAC CGCCAATATT GAAGAAATTA AAAAAGGCCT GAAACTCGGG
GTGGTGAGTG GTGTAACTAC CAATCCCACA CTGGTTGCTA AAGAAGGCAT AAGTGATTAT
AAATCTGTAG TTCAGCAGAT ATGCGCTTTG CTGCCGGAGG GTGATGTTTC TGCCGAAATT
ACGGCTGAAG ACCCTGCCGA AATGCTGAAA CAGGCCCGTG AAATAGCCAA ATGGGCACCC
AATGTAGTGG TCAAGATACC TGCCACTACT GAAGGGTTGG AGATAATTTC CAAGCTAAGC
AAAGAGGGTG TCCGTTTCAA TATGACACTC TGTTTTTCGG TTAACCAAGC TTTGCTGGGG
GCTTTGGCCG GGGCGGCCTT TGTCAGCCCG TTCGTGGGCA GGCTGGACGA CGCCGGGCAT
GACGGCATGA TGCTGATAAA TGATATAGTT AATATATATA AGGAATACGG GTTTGAAACC
CGGGTGATTG CCGCCAGTAT CCGCCATCCG CTTCACTGCA CTCAGGCGGC CCAAACCGGG
GCAAGCATTG CCACTGTACC CTACAAGGTG CTTATGCAGA TGATGAACCA CCCGCTGACA
GATTCGGGTG TTGCCCGTTT CATGGCTGAC TGGAAAAGCG TCCAGAAGTA A
|
|---|
| Protein sequence | MRIFLDTANI EEIKKGLKLG VVSGVTTNPT LVAKEGISDY KSVVQQICAL LPEGDVSAEI
TAEDPAEMLK QAREIAKWAP NVVVKIPATT EGLEIISKLS KEGVRFNMTL CFSVNQALLG
ALAGAAFVSP FVGRLDDAGH DGMMLINDIV NIYKEYGFET RVIAASIRHP LHCTQAAQTG
ASIATVPYKV LMQMMNHPLT DSGVARFMAD WKSVQK
|
|---|
| |