Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1202 |
Symbol | |
ID | 5131626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1176861 |
End bp | 1177439 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530128 |
Product | hypothetical protein |
Protein accession | YP_001214659 |
Protein GI | 147669841 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0030878 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGC GTCAGTATGA CCCAAAAGAA TCACTGTCTT ACCTTACACT TGTGTCAGAA GTTTTGGGTG ATTACAGCGC TTTTCAATCT CCCCAGGATA TAATCCGCCG GTTCGGCGGT AAAAGCCTGA CCGATATTAC CGAAGCTCCT GAAATCCGTT TGCCAGAGCT TACTCCGCCC CTGCCTATAG GTTATGAGCA GAAGGTTTTC CAGTTTAAAG AATCCGGTGC TACCGGCGGC TCTTTTGATG TGGTTTTCAA TAATCAAGGC CAGCTGATAA ATTTTCGGGC ACAGCTCTTC TTTGAGGGTA TGCTGGCCGG CATGAGGGCT ACGTATTATA ATCGCCTGAA ATTGCGCGCT TTGATAGAAC AAATGGCTGA TACGGGGAAT GTCAGTTTTG ACAACCGTTC TTCGCGTTAT TACAGCTATT GCAACGAGCT TATGGTAACT TTCTGCCAGT TGTCTGACTT CGGTCTGACC AGCGTATCCA CATGGATTAC CCAGCGTGAA GAAACCTGCC TGCAGACAAT GGCCGGTTAT TCAGGGGTTA AACTCCAGCC GAATTTTATT GGAGTTTAA
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Protein sequence | MRLRQYDPKE SLSYLTLVSE VLGDYSAFQS PQDIIRRFGG KSLTDITEAP EIRLPELTPP LPIGYEQKVF QFKESGATGG SFDVVFNNQG QLINFRAQLF FEGMLAGMRA TYYNRLKLRA LIEQMADTGN VSFDNRSSRY YSYCNELMVT FCQLSDFGLT SVSTWITQRE ETCLQTMAGY SGVKLQPNFI GV
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