Gene DehaBAV1_1197 details

Gene Information

• Locus tag: DehaBAV1_1197
• Symbol: mscL
• ID: 5131517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 1171418
• End bp: 1171882
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640530122
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001214654
• Protein GI: 147669836
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.932903
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAG AGTTTAAAAT CTTTATCATG CGCGGCAATG TAGTAGATCT GGCTGTGGGT 
ATTGTAATTG GCGCAGCCTT CGGGGCTATT GTAAACTCAC TGGTAAAAGA TGTGCTGATG 
CCCCCTATCG GCTTGCTTTT GGGCAATGTT GATTTTGGCA ATCTGTTTAT CGTCCTTAAG 
GAAGGTGCCA TTGGCGGGCC GTATGAATCC CTGCTGGTTG CCCAAACAGC GGGCGCTGTA 
ACCATAAACT ACGGGGTATT TATTAACGCC TTAATCAACT TTTTAATACT GGCTATGGCT 
ATCTTCTTTT TTGTGGTAAG GCCGCTGAAC CAGCTGGCTG CCCGCCAGAA AAGTAAAGAA 
GCTGTCATTC CTGCCCAAAC TGATAAGAAA GATTGCCCTT ACTGCGCTAC CCAAATACCC 
TTGAAAGCCA GTAAATGCCC TTACTGTACT TCAGAGCTTA TGTAG 

 

Protein sequence

MFKEFKIFIM RGNVVDLAVG IVIGAAFGAI VNSLVKDVLM PPIGLLLGNV DFGNLFIVLK 
EGAIGGPYES LLVAQTAGAV TINYGVFINA LINFLILAMA IFFFVVRPLN QLAARQKSKE 
AVIPAQTDKK DCPYCATQIP LKASKCPYCT SELM