| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1195 |
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| Symbol | |
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| ID | 5131513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1169465 |
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| End bp | 1170721 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530120 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001214652 |
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| Protein GI | 147669834 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00789069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGTT ATTACCTCTG GACTATTGGC TGCCAGATGA ATCAAGCCGA ATCAGACCGG
TTGGGTAGGC TTTTTGAACT GTGGGGTTAC TCTTTAGCCG ATAAAGCTGA AGATGCCGAA
CTGGTACTGG TAAACAGCTG TGTTGTCCGT GAACATGCTG AAAACAAAGT GGTTAACCGC
TTGCATCTTT TACGCAGTTT GAAGAATGAA AATCCTAAAC TCAAAATAGC CCTGACCGGC
TGTTTGGTTG GGCAAGATAT TTCCCTCATA AAGAAAAAAT TTCCATTCGT AGATTATATT
TTTGGTCCGG GCAGTATGCC GGATTGGCGC GAAATTCCGG AAGGGTTTAT TCTGCCGCTT
AGGCCGCCTG TAAGTGCCAA TGTGACCATT ATGCAGGGCT GTAACAATTT CTGTACCTAC
TGTGTTGTGC CTTACCGCCG CGGACGGGAA AAAAGCCGAA GTATAGCTGA AATAGGCTGT
GAAGTGGCTG AACTGGTCAG GCGGGGCAGC CGTGAAGTGG TACTGCTGGG GCAAAATGTA
GATTCCTACG GGCATGACCT GCCTGAAAAG CCCTGTCTGG CAGATTTGCT TTCGGCACTT
CATGACATTA CGGGGCTGTT ACGGATACGT TTTTTAACCA GCCATCCCAA GGATATCAGC
CAGAAGCTTA TAGATGCCAT GGCACACTTG CCTAAGGTCT GCCGCTCGCT CAGCTTGCCG
GTGCAGTCTG GTGATGATAC CATTTTGGCC TCTATGCGGC GGGGATATAC CAATCAGCAA
TACCGTGAGC TGGTGGAACG TATAAAAACC GCCATGCCGG ATATCAGCCT CCAGACAGAT
TTGATAGTAG GCTTTCCGTC TGAAAACGAA GAACAGTTTA ATCAAAGCTA CAAACTGATG
GCCGATATAG GTTATGATGC CATACATGTG GCCGCTTATT CACCCCGCCC CCAGACTGTG
GCTGCCCATG ACATGGCAGA TGATGTCCCC GTTATAGAGA AAAAACGCCG CCTGAAGCTT
ATAGAAGACC TGCAGAAAGA AACAGTAGGC AAGGCAAACG CCGCTCTCAT GGACACATTT
GCCGAGGTGC TTGTGGAAGG GTTGCAAAAG AATAAGTGGC AGGGACGCAC TTTAGGTGGT
AAACTGGTAT TTCTGGAGAG CGATTTACCG CTTGAAGGAT GTCTGGTAAA GGTTAAGATA
TTTAAAACCA GCCCATGGTC TTTGCAGGCA AAGCTGGTAA ATATCATGGA AAGTTAA
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| Protein sequence | MPGYYLWTIG CQMNQAESDR LGRLFELWGY SLADKAEDAE LVLVNSCVVR EHAENKVVNR
LHLLRSLKNE NPKLKIALTG CLVGQDISLI KKKFPFVDYI FGPGSMPDWR EIPEGFILPL
RPPVSANVTI MQGCNNFCTY CVVPYRRGRE KSRSIAEIGC EVAELVRRGS REVVLLGQNV
DSYGHDLPEK PCLADLLSAL HDITGLLRIR FLTSHPKDIS QKLIDAMAHL PKVCRSLSLP
VQSGDDTILA SMRRGYTNQQ YRELVERIKT AMPDISLQTD LIVGFPSENE EQFNQSYKLM
ADIGYDAIHV AAYSPRPQTV AAHDMADDVP VIEKKRRLKL IEDLQKETVG KANAALMDTF
AEVLVEGLQK NKWQGRTLGG KLVFLESDLP LEGCLVKVKI FKTSPWSLQA KLVNIMES
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