Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1192 |
Symbol | |
ID | 5131604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1166745 |
End bp | 1167605 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640530117 |
Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
Protein accession | YP_001214649 |
Protein GI | 147669831 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.672764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAGT CTCAAATTGA GAAAATTATC GACAATGCCT GTAACGAAGA TTTTGCCCGG GGTGATGTTA CTACTGAAAC ACTTATCCCG TCTTCTTTGG CAGGACGGGC TATTATAGTT GCCAAGCAGG ATGGGGTACT GGCTGGAGCT GAAGTAGCCA AGATAGTATT TGTAAAGCAT GACCCTACCA TGGAAGTGGA AATACTGATA GAAGACGGCA AGAGGGTAAA AACCGGAGAT GTTATCATGG TGCTTAACGG CAGGGTGATA AACATACTCA AGTGTGAACG TACCGCCCTG AATTTCATAA CCCACTTAAG CGGCATTGCA TCTCTTACGG CCAAGTATAT TTCCAAAGTA GATGGATTGA ATGTTTCTCT GGCTGATACC CGTAAAACCA TACCCGGTAT GCGGATACTG GAAAAATATG CTGTATATGC CGCAGGCGGC AAAAGCAACA GACCTGATCT GGCTTGCGGG ATACTTATAA AGGATAACCA CCTGATGGCT TTGTCTGCCA AAGGCATAGG TGTAAAAGAA GCCATTGAAA AGGCTAAAAC CAACAAGAGC AAACTGCCGG TAACTATAGA AGTAAATACT CTGGAACAGG TAGCACAAGC CATAGAGGCT GCGCCCAATT CCATTTTACT GGATAATATG AGCATTGCCG ATATGAAAAA GGCAGTTGAT ATTATACCGG AGACCATAAA GATAGAGGCT TCCGGCAATA TCAATCTGGA TAATGTCCGT GAAGTGGCCA TGACCGGGGT TGATGTTATT TCAGTGGGGG CTTTGACTCA TTCGGCTCCG GCGCTGGACT TCAGTTTGGA GTTTCCCGTT CAGCAGCAGG CACAGGAATA G
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Protein sequence | MSQSQIEKII DNACNEDFAR GDVTTETLIP SSLAGRAIIV AKQDGVLAGA EVAKIVFVKH DPTMEVEILI EDGKRVKTGD VIMVLNGRVI NILKCERTAL NFITHLSGIA SLTAKYISKV DGLNVSLADT RKTIPGMRIL EKYAVYAAGG KSNRPDLACG ILIKDNHLMA LSAKGIGVKE AIEKAKTNKS KLPVTIEVNT LEQVAQAIEA APNSILLDNM SIADMKKAVD IIPETIKIEA SGNINLDNVR EVAMTGVDVI SVGALTHSAP ALDFSLEFPV QQQAQE
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