| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1191 |
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| Symbol | |
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| ID | 5132281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1164177 |
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| End bp | 1166702 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530116 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001214648 |
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| Protein GI | 147669830 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTATCT GGGCTCTGGT ACCGCTTGTA ACCAGTATTG CATATTTAGT GCTGCTGGCG
GTTGTTCTGC TTTCAAAACG GCAGTCTATC ACCAGAGTTT TTTCCGTGTT TTTAGGTGCC
GCTGCTTTCT GGAGTTTCAC CTCTTTCATG CTCCATATTG ATGCCCCGCC GGAGCAAACC
CTGATCCGGC ACAACCTGCT GAATATTGCC CTGTTTGCCG CCATGCTTAT GTACTACCAG
TTTATCCGCG CCTATACCAA CCGCAGAGGC AAACTTTTTC TGATAATAGG TTACATGGCA
CTGGCGCTGG ATATTTTCCT TAACCTGACC GGACAGCTGG TCACATCCGC CTACATAGAG
GACAATGTTG TTTACCACAC AATAACTCCC GTGTTTTATT CTGTTTTTAT ATTTGCGTTA
TCATTCATCG GGGTAATTAT TTACCACCTA GTCCAAAAAT ATCGCCAATC TACAGACCCA
GCTGAACGCA ACCGCACACT GTATTTGGTA CTGGGATGGG TAATAGTAGT CCTTTCAAGC
TATACCAATC TTAACGACAA CCCCCGTATC TACGGCCTTC CCCTTGACCA TGTGGGCAAC
TTTATAAATG CGGGGATTAT CGTTTACGCT ATCACCCAGT ACCGTTTGAT TGATATCAAA
CTGATAGCCC GCAAAACCCT TACTTACGTC CTTCTATTCT TCTCCATGAT AACTGTATAT
GCAGGAGCTA TATTTATAGC TACGCGGATA TTCCCTGCCG AAGAAATGTC TACTATCATC
CTTATGACAA CCCTGATTGT ACTGATACTG GCCATGACAG CCCGCCCGTT GAGAACATTT
ATTGAAAAGC GCATAGACCG TCTGTTTTAC CAGGAAACCT ATGAATCCCG TCTGTCCCTC
ATGGGCTTTT CCCGCAAGAT GGGCAATATA CTTAATCTGG AGGAACTGGC CAAATCGCTG
TTACCTGATC TGGCTAAGTC TTTAAATATA AATAAAGCTG CGCTGCTTTT CCCTGATGTT
GCCAGCGGCG AATTCTCTAT AGAGTACATC TACCCCGCAG ATGACCACCT TAAAACCCAG
TTCAAATTGG CGGCGGACAA CCCCGTTATT TCCTGGCTGG ATAAAAATAA CGCCCAGCTT
TATCTGAATA AACTGGACAA TCTGCCTGAA CTGAAAGGCT TATGGCAGAT AGAAAAAGAG
CAACTCCAAA AATCAGAGAT GGGGTTGTTG TATCCCATTA AAAGCCGCGA CAAACTTATA
GGCATTATCG GGCTGGGAAA CAAGAAGCGG GGGGGTATAT ATTCTACCGA GGATTTGGAT
ATGCTGATAA GTGTGGCTAA TCAGGCTGGT GTTATTATAG AAAATGCCCA GCTCTACACT
CAGGCCACTA TCCGAGCCAA TACCGATGAA CTTACCCGCC TGTATAATCA CCGCCACTTC
CATGAGCGCA TAGAACAGGA AATAGCCCGC GGTTCACGCT TCGGCAATAC CTTTTCCCTG
ATACTGCTGG ACCTTGACCT GTTTAAGGTC TACAACGACG TATACGGCCA TCTGGCCGGT
GACCAACTGC TACGCAGACT GGGTAAAATA CTGGAAAACT CCATCCGCTC TATCGACATG
GCTTTCCGCT ATGGCGGTGA GGAATTTGCC ATAATGCTAC CCGGCACCAA GATTGAAGAC
GCTTACCATG TAGCCGAACG TATCCGAAAG AATATTGAGT CTAAATCTTC CTTCCGTGAC
ATGCCGATAA CTGCTTCTCT GGGTCTGGCT AACTGGCCGA CTGACGGGGT AATGAAAGAG
GAGATTATAG CCAAGGCTGA TGCCGCCCTG TACCGTTCAA AGGAAACCGG ACGAAACCGC
ACCAGCCTGC CTGCTGACCT GAATAATAAC TCCACCCAGA TAATCAGCTC TGAATTGGAA
GCCCGCCCCA AAGCCATGTC CATTATCTAT GCTCTGGCGG CCACGGTTGA CGCCAAAGAT
CACTATACTT ACGGGCATTC CCGCAAGGTT AGTGAATATG CGGTGGCTCT GGCAGAGATA
TTGAAGCTCT CTGAGGAAAA AGTGGAAACT ATACGGGCAG CCGGACTATT GCACGATATC
GGCAAGATAG GCGTACCTGA CCATATCCTG ACAAAACCCT CCGCTCTGGA CGATGAAGAA
TGGGAACCTA TCAAGACCCA CCCGGAACTG GGAGTGGAGA TATTAAAACG TATCATGGAT
CTGGTTAACT GCCTTCCGGC TATACTCCAT CACCATGAAC ACTTTGACGG CAGCGGGTAT
CCTTTTGGAC TGAAGGGTGA AAACATACCT CTGGAAGCCA GAATACTCAG CATAGCAGAT
GCCTATGATG CGGTTACTTC ACCCCGCCCC TATCGCACCC AGCTTCACAC TGAGCAAGCG
GTAGCCGAAC TGAAACGTTG TGCCGGCTCC CAGTTTGACC CTGAGCTGGT AGATATCTTC
TGCCATGTTA TTAATCCTGA AGATTCCCCG CAGCTAAAAG CCTCACCTGA AACCGGCACT
GAATAA
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| Protein sequence | MTIWALVPLV TSIAYLVLLA VVLLSKRQSI TRVFSVFLGA AAFWSFTSFM LHIDAPPEQT
LIRHNLLNIA LFAAMLMYYQ FIRAYTNRRG KLFLIIGYMA LALDIFLNLT GQLVTSAYIE
DNVVYHTITP VFYSVFIFAL SFIGVIIYHL VQKYRQSTDP AERNRTLYLV LGWVIVVLSS
YTNLNDNPRI YGLPLDHVGN FINAGIIVYA ITQYRLIDIK LIARKTLTYV LLFFSMITVY
AGAIFIATRI FPAEEMSTII LMTTLIVLIL AMTARPLRTF IEKRIDRLFY QETYESRLSL
MGFSRKMGNI LNLEELAKSL LPDLAKSLNI NKAALLFPDV ASGEFSIEYI YPADDHLKTQ
FKLAADNPVI SWLDKNNAQL YLNKLDNLPE LKGLWQIEKE QLQKSEMGLL YPIKSRDKLI
GIIGLGNKKR GGIYSTEDLD MLISVANQAG VIIENAQLYT QATIRANTDE LTRLYNHRHF
HERIEQEIAR GSRFGNTFSL ILLDLDLFKV YNDVYGHLAG DQLLRRLGKI LENSIRSIDM
AFRYGGEEFA IMLPGTKIED AYHVAERIRK NIESKSSFRD MPITASLGLA NWPTDGVMKE
EIIAKADAAL YRSKETGRNR TSLPADLNNN STQIISSELE ARPKAMSIIY ALAATVDAKD
HYTYGHSRKV SEYAVALAEI LKLSEEKVET IRAAGLLHDI GKIGVPDHIL TKPSALDDEE
WEPIKTHPEL GVEILKRIMD LVNCLPAILH HHEHFDGSGY PFGLKGENIP LEARILSIAD
AYDAVTSPRP YRTQLHTEQA VAELKRCAGS QFDPELVDIF CHVINPEDSP QLKASPETGT
E
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