| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1159 |
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| Symbol | |
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| ID | 5132444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1135818 |
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| End bp | 1136357 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530084 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001214616 |
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| Protein GI | 147669798 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02952] RNA polymerase sigma-70 factor, TIGR02952 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.260495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAACAG AAAGACACCT GGTTGAGCTT GCTCAACAAA AAGATGAGCA GGCATTTGCC
CGACTATATG AGGAATATTT CGATAAAATT TATCGCTATA TTGCTTTGAA GATTGGCAAC
AAAATGGAGG CCGAGGATTT GACCCAACAG GTCTTTATGA ACGCTCTCCG GTCTATGTCT
TCCTTTAAAT GGCAAGATAA TACACCATTC TCTGCCTGGC TATACCGTAT TGCCCATAAC
CAGATAGTAG ACTACCTGAG GAAGAAAAGC CGCCAGCCCA CGGTGGATAT AGAGATAATT
GCCCCGCTGG CTTGTGCCGA TGACCCGGTG GAAACTACCG AAGTAAATAT AGACTATGAG
AAGTTTGTGA AGGTATCTGC CAAACTTACC CCCGCCCAGC AGGAGGTAAT TTCCCTGCGG
TTTTCTTCGG ATTTGCCTAT CGCCGAGGTG GCCAAAATAA TGAACAGAAC TCCGGGTGCG
GTCAAGGCGC TGCAGCACAG TGCGGTATCC TCACTCCGCC GAATGCTCTC TGGAGCGTGA
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| Protein sequence | MQTERHLVEL AQQKDEQAFA RLYEEYFDKI YRYIALKIGN KMEAEDLTQQ VFMNALRSMS
SFKWQDNTPF SAWLYRIAHN QIVDYLRKKS RQPTVDIEII APLACADDPV ETTEVNIDYE
KFVKVSAKLT PAQQEVISLR FSSDLPIAEV AKIMNRTPGA VKALQHSAVS SLRRMLSGA
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