| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1155 |
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| Symbol | |
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| ID | 5131700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1132072 |
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| End bp | 1132926 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530080 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_001214612 |
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| Protein GI | 147669794 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGG AATGTGCATC CAATATCGGG TTTTGTTTTG GCGTACACCG CGCTATAAAC
ATACTGGAAA AAACGGCTTC CGAACGGGGC GGGGTGGAGA CTCTGGGTGC TTTAGTGCAT
AACCAGCAGG TTTTAAACCG CCTTTCCGGT ATGGGTGTAC GGGTTGTAAA AAATATAGAT
GACATCAGCG GCCGTACTGT AGCTATTTCC TCCCACGGGG TAGGACCTGC GGTTCTGGCT
GAGCTAAAAT CCAAAGGGCT GGAAATAGTG GATACCACCT GTCCTTTCGT CAAACGGGCT
CAGGTAGCCG CCAAACGCTT TCATGATGCA GGGTTTTTTA CTGTAATTTA CGGTGATGTA
AACCACCCGG AGGTCAAGGG CATACTGGGT TGGGCGGGTG GAAACGGACT GGCTACCCTT
AACCCGCAGG GATTAGATGA CATCCCGGAT TTATCCCGTT ATATAGGCGT ACTTTCTCAG
ACTACCCAGA TACCCACCGG TTTCACTTCT TTTGTTAAAA ATGTTATAGA TCAGGCTCTG
GTCAAAGATG CCGAAATTCG TATAGCCGAT ACCCTCTGCC ACGATATCCG TGACCGGCAG
GCGGCCGCTC TGGAACTGGC GGGACGGGTA GATCTGATGC TGGTTATCGG CGGGCACAAC
AGTGCCAATA CCCGCCACCT GCTGGATTTA TGCAAAACCG TATCCAACAC CCATTTGATA
GAGACTGCTT CAGAACTGCA AACTGACTGG TTAAAGGGGG TAAGCCGCAT CGGCATTACT
TCCGGGGCTT CCACTGATGA AACCACCATA TCCGAAGTTT GTTCGTATCT GGATAGGCTT
TCAGCCGGAG CTTAG
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| Protein sequence | MKVECASNIG FCFGVHRAIN ILEKTASERG GVETLGALVH NQQVLNRLSG MGVRVVKNID
DISGRTVAIS SHGVGPAVLA ELKSKGLEIV DTTCPFVKRA QVAAKRFHDA GFFTVIYGDV
NHPEVKGILG WAGGNGLATL NPQGLDDIPD LSRYIGVLSQ TTQIPTGFTS FVKNVIDQAL
VKDAEIRIAD TLCHDIRDRQ AAALELAGRV DLMLVIGGHN SANTRHLLDL CKTVSNTHLI
ETASELQTDW LKGVSRIGIT SGASTDETTI SEVCSYLDRL SAGA
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