Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1150 |
Symbol | |
ID | 5131789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1127512 |
End bp | 1128432 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640530075 |
Product | ABC transporter related |
Protein accession | YP_001214607 |
Protein GI | 147669789 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGAAG TAAACAACCT TAGCAAAGTC TTTAAGGGCA AAACGGTGCT GGATAATATC ACATTCAGTG TCGCCCCGGG GGAAATATTC GGTTTTCTGG GCCCCAACGG TGCAGGGAAA ACCACTACCA TGAGAATCAT TCTGGGGCTG TTAAACCCCT CTAGCGGTAA GGCAACTCTG AATGGCAAAA ATCTGGCTAA AGATGATACC GCCCGAAGCA ATGTAGGTGT CCTGCTGGAG GTAGACGGCA TCTATGACCG CCTGAGTGCC TACGAAAACC TGCGGTATTT CGCGGATATT TACCAGATAC CCAACCGCGA AGCCCGCATA AATGAACTAC TGGAATTTTT TAACCTGAGC GAACGCCGAA ATGACCCAGC CGGCAAATTT TCCAAGGGCA TGAAGCGTAA ACTGGCTCTG GCCAAGGCTA TTATGCACAA ACCGGAGGTG CTATTTCTGG ATGAACCGGC TTCCGGCCTT GACCCTGAAG CCCAGAAAAG CTTCCGTGAC CTTACCCTGT CCCTTTCCCG CGAGGGCAAT ATGACTATTT TCCTGAATTC GCACGATCTG GACGAAGTTC AGCGTATCTG CAATAAAGTA GCCATTATAA AGGGCGGTAA ACTACTGGCT TGGGATAGCC TGACCAATCT GGACAGGAAA AACCGCCAAC CCGGTATGGA ACTTTCATTC AGTAACACTG CTGATATTGA GCAGGCTGAA AAACTGCTTG TTTCCGCCAA ACTGGCGGTT GATATTCACC GCACACAGGA AGGCCTGACC CTGACCCCGG CTGAAGGCGT AGATACCCCA AAGATAATCA CCTATCTTGC CGGTCACAAT ATCCAGCTGG AAGAGGTACG TAAGCTAAAG CGATCTCTGG AAGAAATATA TCTGGAGACT ATGAAACAGG AGACCAAGTA A
|
Protein sequence | MIEVNNLSKV FKGKTVLDNI TFSVAPGEIF GFLGPNGAGK TTTMRIILGL LNPSSGKATL NGKNLAKDDT ARSNVGVLLE VDGIYDRLSA YENLRYFADI YQIPNREARI NELLEFFNLS ERRNDPAGKF SKGMKRKLAL AKAIMHKPEV LFLDEPASGL DPEAQKSFRD LTLSLSREGN MTIFLNSHDL DEVQRICNKV AIIKGGKLLA WDSLTNLDRK NRQPGMELSF SNTADIEQAE KLLVSAKLAV DIHRTQEGLT LTPAEGVDTP KIITYLAGHN IQLEEVRKLK RSLEEIYLET MKQETK
|
| |