| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1138 |
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| Symbol | rpmE |
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| ID | 5132249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1120914 |
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| End bp | 1121120 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530063 |
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| Product | 50S ribosomal protein L31 |
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| Protein accession | YP_001214595 |
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| Protein GI | 147669777 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000594554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGAAA AAATACACCC TAAATATAAT ACCGCCACCA ACGTAAGTTG TGCCTGCGGC
AACACTTTTA CAGTGGGTTC TACCAAGGAC AATATCAAGG TGGAACTTTG TGCCCAGTGC
CACCCCTTCT ACACCGGTGA GAAAAGAATG GTTGATACCG CCGGACGGGT GGAGAAATTC
CGCCAGCGCT ACGGCAGCAA AACCTAA
|
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| Protein sequence | MKEKIHPKYN TATNVSCACG NTFTVGSTKD NIKVELCAQC HPFYTGEKRM VDTAGRVEKF
RQRYGSKT
|
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| |