Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1107 |
Symbol | |
ID | 5131053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1096381 |
End bp | 1097490 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640530032 |
Product | dienelactone hydrolase-like protein |
Protein accession | YP_001214565 |
Protein GI | 147669747 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.12853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTCGCA ATATTACGAT AAGCCAAACT ACTAAAACCA TCTTCCGATG GGGAATGGTA CTGGCAAGTA TTGCTTTGCT CTGGTTGCCG ATGATAATCA GCGCAGCCAT AGTGCCTTAT GTAGATTCAA ATCTGGTAGC CAAATATCAA ATAGGCAATA CACAAGGGCA AATAACCTGC TACCAAGCGG GTAAAGACCC TGAGGTTCTT GGACTTTCAA TTTGGTACCC TACCAGCGGC GAGGGCAGCT TTTCTTTTGA CGGGTTCACC GGCACACTGG CAGATTTGAG CGGCGGGCCG TATCCGCTGG TTATTTTTAA TCACGGACTG AATGCCAATT ATATTGACCC GCTTTACCTT AAAGAAAGCC TGGTGGGACA GGGCTATGTA GTGGCTTCAA TCCATTTTAA CGATATGCCT TCAATAAGTT TTTCGGATTA TCTTTCCACT ACCCCCCGGA CAGACTGGGA TAACCGTACT GATAACCTGT TTTCAGCAGT AGATTACTTT TTCCGTGACA ATTACCTGAA CTATCTGGAA AGTTTCCGCA TAAATCAGTC ACGGCTTAGT CTGGATTACG TACTGAATCT AAACGAAAAC CCTGCTTCAC CTTTTTACGG GCTGATAGAT GTAAATAAGA TTGGCATGGC GGGACATTCA CTGGGAGGAC TGACTACGCT GGCGCTTAGC GGTGCCCATC CTGACCCGGC TATAGCTGAC CCGCGAATAA AAGCTATAAT CCTTCTAGCT ACGCCGGCCT ATCCCTTCGA AAATAATCTG GGCAACATAA ATATACCCGT AATGGTTATG CGGGGGGATT ATGACCTGAT GATAACCAGT GCCGAGGATA ATCTCTGGGT AACGGCCGAG GGGCTTAAAC CGCCTGAATT TTTTCTGGTA GTCAGTCAAT CCCACCACTT TACCTTCAGC CAATCACCTT ACAGCATCTC TGACCCGTCG CCTCACATAA ACCATGATGC GCGGCTTGAA GTTATCATGC TTTACAGTCT GGCATTTATG GACTACTACC TGAAGAATGA TGCAAATGCC CTGAAGGTTC TGGAACAGCA AGACCCCATG CTGGCTCAAT ACTACTACGA ACTGGGCTAA
|
Protein sequence | MIRNITISQT TKTIFRWGMV LASIALLWLP MIISAAIVPY VDSNLVAKYQ IGNTQGQITC YQAGKDPEVL GLSIWYPTSG EGSFSFDGFT GTLADLSGGP YPLVIFNHGL NANYIDPLYL KESLVGQGYV VASIHFNDMP SISFSDYLST TPRTDWDNRT DNLFSAVDYF FRDNYLNYLE SFRINQSRLS LDYVLNLNEN PASPFYGLID VNKIGMAGHS LGGLTTLALS GAHPDPAIAD PRIKAIILLA TPAYPFENNL GNINIPVMVM RGDYDLMITS AEDNLWVTAE GLKPPEFFLV VSQSHHFTFS QSPYSISDPS PHINHDARLE VIMLYSLAFM DYYLKNDANA LKVLEQQDPM LAQYYYELG
|
| |