| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1028 |
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| Symbol | |
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| ID | 5131918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1021478 |
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| End bp | 1022293 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529953 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_001214486 |
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| Protein GI | 147669668 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGACT TTCAGTTAGC GGTTATAGAT GTAGACGGAA CCCTGATAAA TAAACAGGGC
AAAATATCAG CGGCAGATAA AGAGGCTATT GGCAAAGCCA GAGACAAAGG AATTTTGGTT
GCCCTTTCAA CCGGCAGGGT TGTACCTGCC TGCACGTATC TACTGGAAGA ACTGGGTCTG
GACGGCTTTC ATATATTCTG TGACGGGGCT TTGGTTTACA ACCCTGCTAC CGCCCAGACC
TGCTATTCCC AGCCTCTTTG CCAAGGGCCG CTTCTTTCGG CTATTGAGTT TGTGCGGGAA
CACAATATTT ATCTGGAGCT TTATACTATA CTGGACTACT ACGTAGAGTA CGAAAACTGG
TCTGCCAAGA TGCATCGCGA ATTTTTTCGT ATTTCTCCTA CCGTTACTGA TTTTAAAAAA
GTAGCCCTGA CGCAGGACGT GCAGAAAATA GAACTGATGG TGCATGACCA GACGGAACGC
AGGGGGGCGG AACTCTTCAT GTCCCGTTTT GAAGATGATT TCCATTTCTC TATTGCCCGT
GCTCCGGCTT ACCCTGAGGT GGAGTTTGTA AATATTGTCA GTCCGGGTAT CTCCAAAGGC
AGGGCACTGG AAAAAATGGC TGCCCAGATG GGTATCTCAC TAAGGAATGT TATTGCGTTC
GGGGACGGAA GCAACGATTT GCCCTTATTC AGGGCGGCAG GTTTCGGAGT GGCTATGGGC
AACGCCAGAG CCGAACTTAA AGAAATAGCG GATTACGTTA CCTTAGACGT AGAAGAAAGC
GGCCTTGCAG CCGCTTTCAA TAAGTTTCTT ATTTAA
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| Protein sequence | MPDFQLAVID VDGTLINKQG KISAADKEAI GKARDKGILV ALSTGRVVPA CTYLLEELGL
DGFHIFCDGA LVYNPATAQT CYSQPLCQGP LLSAIEFVRE HNIYLELYTI LDYYVEYENW
SAKMHREFFR ISPTVTDFKK VALTQDVQKI ELMVHDQTER RGAELFMSRF EDDFHFSIAR
APAYPEVEFV NIVSPGISKG RALEKMAAQM GISLRNVIAF GDGSNDLPLF RAAGFGVAMG
NARAELKEIA DYVTLDVEES GLAAAFNKFL I
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