| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1011 |
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| Symbol | |
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| ID | 5132089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 999908 |
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| End bp | 1001002 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529936 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001214469 |
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| Protein GI | 147669651 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATA CAGCATACAT GGTACTGGAG GACGGAACAG TATTTACCGG CAAAAGCTTC
GGAGCGGAAA CTGAAGCTAT AGGCGAAGTA GTCTTCAATA CCAGCATGAA CGGATATCAG
GAAATGCTGA CCGACCCTTC GTATACCGGC CAGATTATCG TCCCCACTTA CCCCCTTATA
GGTAATTACG GGATAAACCC CTTTGATAAT GAATCTGCCT GCATCAGAGC AACTGCCTTT
GCAGTCCATC AGGAATGCCG CCAGCCCAGC CACTACCAAA GCACCCAAAC GGTTCATTCC
TTTCTGGAAA AGGCTGGCAT ACCCGGCATA AGCGGTCTTG ATACCCGTGC CATTACCCGC
AAACTGCGCT TAGCCGGGGT AATGAGGGGC ATGGTAACCA GTACCAAAAC ACCTGAAGAA
GCCCTGAAAA TTATCCGCAA TACGCCTGAC TACGGACAGA TTGATTTTGT ACGCAAAATA
AGCACACCCT CACCATATGA ATGGCAGAAA GAAAAACCCT CTTTTGCCGG CTTCCATGTA
GCAGTACTGA ACTGCGGGCT TAAGTATTCC ATACTTAACC AGCTTAAATC CCACGGCTGC
AAGGTAACCG TGTTGCCCTG CACCACCAGC CCCAAAGAAA TTGACACACT TAATCCTGAC
GGCATAGTTC TTTCGCCCGG CCCCGGCAAC CCCGAACTGC TGGACTATCT GATAACCACC
GTCAGACATG TGTGCGAAAA ATACCCGGTC ATGGGCATCT GTCTTGGCAA CCAGCTGATT
GGCAGAGCCT TCGGTGCCAA GACATTTAAA CTGAAATTCG GACACCGAGG CGGAAACCAC
CCGGTCAAAG ACCTTGAGAG CGGACGGGTG TATATAACCT CGCAAAACCA CGGCTATTCT
ATTGACCCTG TCACCCTGAA AAATGACCTG AAAGTCAGTC ACCTTAACCT GAATGATGGT
ACTGTGGAGG GGCTTCGCCA CCGTGAACTG CCCGTATTCT CTATCCAGTA TCACTCTGAG
GCCTCACCCG GCCCGATGGA TTCCACTTAT CTGTTTAAGC AGTTTGTGGA AATGATAAAG
CAAACCAAAA AGTAA
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| Protein sequence | MTNTAYMVLE DGTVFTGKSF GAETEAIGEV VFNTSMNGYQ EMLTDPSYTG QIIVPTYPLI
GNYGINPFDN ESACIRATAF AVHQECRQPS HYQSTQTVHS FLEKAGIPGI SGLDTRAITR
KLRLAGVMRG MVTSTKTPEE ALKIIRNTPD YGQIDFVRKI STPSPYEWQK EKPSFAGFHV
AVLNCGLKYS ILNQLKSHGC KVTVLPCTTS PKEIDTLNPD GIVLSPGPGN PELLDYLITT
VRHVCEKYPV MGICLGNQLI GRAFGAKTFK LKFGHRGGNH PVKDLESGRV YITSQNHGYS
IDPVTLKNDL KVSHLNLNDG TVEGLRHREL PVFSIQYHSE ASPGPMDSTY LFKQFVEMIK
QTKK
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