Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1007 |
Symbol | |
ID | 5131988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 994553 |
End bp | 996769 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640529932 |
Product | UvrD/REP helicase |
Protein accession | YP_001214465 |
Protein GI | 147669647 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACA TACTAACAGG TCTAAACCCC GCTCAAAAAA AGGCCGTTGA AGCCGTGGAA GGGCCGGTGC TTATACTGGC CGGTCCGGGC AGTGGTAAAA CCAGAGTTAT TACCCACCGG ATTGCCTACC TGATAAAAGT AGTAGGTATA ACTCCCCACC GCATTATGGC TGTTACTTTT ACCAACAAAG CCGCCCGCGA AATGGAAACC CGCTTGAACC AGCTGGCTCC TTCAGCGGTG GGACGCCTGA CCATGGGTAC TTTCCACGCT ATTTGTGCCC GCATACTAAG GCAGGACGGT CTTCCTCTGG GTGTGCCGTC TGACTTTGTG ATATACGATG ATGACGACCA GCAGAGCCTT ATAAAACAGG CCATGGCTGA GCTTGAGCTT GACCCGAAAC GTTATCCGCC CGCTTCCATA AAAAATGCTA TCAGCCAAGC CAAAAGCCAG CTGGTGCTTC CGGCCTATTA CTTTGAAAAG GGCAGGAGCT ATTTTGAAGA GATGGTAGGC AGGGTTTATG AACTCTATGA GAAACGCCTC AAGCAGAACA AGGCTCTGGA TTTTGATGAC CTTTTGTTAA AGGTTGTCCA GCTTTTTAAG CAACACCCTG AGGTGCTGGC CGGATACCAG GAACGCTATC TGCATGTAAT GGTAGATGAG TTTCAAGATA CCAATCTGGT TCAGTACGAA CTGGTCAAGA TGCTTTCAGC CAAGTACCGA AATATCTGTG TGGTGGGTGA CCCTGACCAG TCTATTTATT CATGGCGTTC TGCAGACCTT AGAAATGTTT TCAACTTTGA GACTGATAAT CCGGGTGCGA AAGTGATTTT GCTTGAGCAG AACTATCGCT CCACTAAAAA TATTCTGGAA GCAGCTTCAT GTGTTATTGC CCCGAACAGC GGACGCAAGC CTATCAGTTT GTGGACCGAA AACGAATCCG GCCAGCCTAT AGCTGTGGTG GAAACCTTTA ACGAACAGGA AGAAGCCCAG TTTGTGGTTT CTGAAATTGA GAAGCTCACC CGCTATGAAA AGTTCAGCCC CGGAAATATA GCTATTCTCT ACCGCACCAA CGCCCAGTCG CGGGCTTTGG AGGAAGCTTT TATCCGTTAC GGCATGCCTT ACCGTCTGGT TTCCGGCACT CGGTTCTACC AGCGGCGCGA GGTTAAAGAT ATTGTGGCCT ATCTGCGTTT ACTTCAAAAC CCGCAAGATA GCGTCAGCCT CCAAAGGGTT ATAAATATAC CCACCCGCGG AATAGGGGCT AAAACCCTTT CAGACCTTGC CCAGTTTGCC AGAGAGCAGG ATATAAGTCT CTACCAGTCA CTTATAAATT TGTCAGATGA AAATGCCCCC AAACCGCCAA TACCCAGCCG CGGTTTGAAA CCCCTGACTG ATTTTGGGGC TTTGCTGAAA TCACTTATCA TTGATGCTCA AACCCTGCCC CTTTTAAACC TGCTGGACAG GCTGCTTGAG GGTATAAGCT ACCGTGAATT TCTGTTTGCA TCCGAAGATG GAGAGGAACG CTGGGATAAT ATACTTGAGT TGCGGACTGT TGCCCAGCAG TATCAGGAAA TACTCCCGCC CGAAGGGCTT TCGGCCTTTC TGGAAAGTGT GGCACTGGTC TCGGATTTGG ATAGCCTTGA AGAAGGTGTT TCGGCAGTTA CCCTTATCAC CTTGCATCAG GCTAAAGGGC TGGAGTATCC GGTGGTTTTT ATGGTGGGTA TGGAAGAGGG TGTCTTGCCC CACAACCGTT CGTTTGATGA CCCTGCCCAG ATGCAGGAAG AACGCCGTCT GTGCTATGTG GGTGTAACCC GTGCCAAGAA ACGCCTTTAT CTGGTGCGGG CTTTCCGTCG CTCACTTATG GGGCAGAGCA ACGTAAATGA ACCTTCCCGT TATCTTAAAG ACATACCTCA AAGCATTACC AAAGGCCGTG AAAAACAGCC TCTGCTTGGG CAGCAAACCC CCGGACAGGC GGTTTTGCCT GTTATAAAAC AGCATGTGCA AAGTGCGGGC ATGCTCGTTA AGTCTGCCCC GTCTCCTGCC CCCAAATTAC TGGAATTGGA AGCGGGTGAC AGAGTGCTGC ACCCCCAGTT TGGCGAAGGG ATTGTGACCA GTATCAACCG GATGAAAAAT GATGCCGAGG TTATGATATC TTTCCATTCT GTCGGCATGA AGCGCCTGCT GCTCAGTTTT GCCCGCCTGA CCAAACTGGA AAACTAA
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Protein sequence | MQDILTGLNP AQKKAVEAVE GPVLILAGPG SGKTRVITHR IAYLIKVVGI TPHRIMAVTF TNKAAREMET RLNQLAPSAV GRLTMGTFHA ICARILRQDG LPLGVPSDFV IYDDDDQQSL IKQAMAELEL DPKRYPPASI KNAISQAKSQ LVLPAYYFEK GRSYFEEMVG RVYELYEKRL KQNKALDFDD LLLKVVQLFK QHPEVLAGYQ ERYLHVMVDE FQDTNLVQYE LVKMLSAKYR NICVVGDPDQ SIYSWRSADL RNVFNFETDN PGAKVILLEQ NYRSTKNILE AASCVIAPNS GRKPISLWTE NESGQPIAVV ETFNEQEEAQ FVVSEIEKLT RYEKFSPGNI AILYRTNAQS RALEEAFIRY GMPYRLVSGT RFYQRREVKD IVAYLRLLQN PQDSVSLQRV INIPTRGIGA KTLSDLAQFA REQDISLYQS LINLSDENAP KPPIPSRGLK PLTDFGALLK SLIIDAQTLP LLNLLDRLLE GISYREFLFA SEDGEERWDN ILELRTVAQQ YQEILPPEGL SAFLESVALV SDLDSLEEGV SAVTLITLHQ AKGLEYPVVF MVGMEEGVLP HNRSFDDPAQ MQEERRLCYV GVTRAKKRLY LVRAFRRSLM GQSNVNEPSR YLKDIPQSIT KGREKQPLLG QQTPGQAVLP VIKQHVQSAG MLVKSAPSPA PKLLELEAGD RVLHPQFGEG IVTSINRMKN DAEVMISFHS VGMKRLLLSF ARLTKLEN
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