| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0943 |
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| Symbol | |
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| ID | 5131672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 928341 |
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| End bp | 930017 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529867 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001214401 |
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| Protein GI | 147669583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0446161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGGA AGTTATTATA CCTGCTGGCA GCCCTGTTAA TCATTGTGCC AATAGTGTTT
AGCGGTTGTA CCAGTGACGA CAACGATGAC GACGGGGATG ACGGAACTGT CACCACTCCT
CAGGTATTCC GTGTCAATCT GGCAGGTGAA CCCAACACCA TAGATCCCAA CAAGGCTTCT
TGGGCTACGG AGAGATCTGT AATCATGCTA CTCTTTGTAG GTCTGCTGGA CTTTAACTCA
GACCTGTCCC TAAAGGCAGC GTGTGCCCAG GAAATTCCCA CCGTGGCTAA CGGGGGTATT
TCAGCAGATG GTTTGACCTA TACCTTCAAA GTCAAATCAA ACGTGACCTG GAGCGATGGC
TCAAAGGTTA CCGCCCATGA CTTTGAGTAT AGCATCAAGA GAATGCTGGA TCCCGACACA
GCTGCAGAAT ATGCATCTTT CTACTTTGAT ATTGTAGGTG CGGCGGCATT TAATGCTGCG
GCCAGTGCTG ATGCAGCTAC CAAGACTGCC CTGCGGAATG CTGTGGGGGT GACAGCGGTA
GACGATACCA GTCTGCGCAT TACCCTGAAT CAGACCCGCC CCACCTTCCT GTCTATTATG
GCTCTTTGGC CTACCTCACC GGTAAAGGAA AGCGTTATTA CTGCCAAGGG TAATTTGTGG
ACTGAAGCCG GCAACCTTAT AGGTAACGGG CCGTATACCC TGAAAGAATG GGTGCATCAG
GACCACATGA CGTTCACTCT CAATACCAAT TATTGGGATA CCAAGCCCAC CCTGACTGAG
ATTAAGTACC TGATGATTCT GGATGCAACC CAGGAATTAT CGGCTTACAA GAATGGTGAG
CTTGATATGG CCAGAGTCCC GGTAGGCACG GAAACAGCTA CTTTGGCTGA TCCGGTTTAC
GGTAAGCAAG TGGTACGGAA CAATGACCTT ACTACTTTTG CTTTCCAGTT CAATGTTAAT
AAAGCCCCCT TTGATAATCT GCTGGTACGC GAGGCTATGT CCTGTGCCAT TGACCGGGTG
GCCTTTGTGG AGCAGGTTAG AGGCGGGGTA GGTACTCCGG CTTATTCGTG GATTCCGCCC
GGCATGCCTG GTTACGATGC TGATTTGGGC AAAGATTTTG CTTTTAATGT CACCAAGGCC
AAACAGCTTT TGGCTGATGC CGGCTATCCT AATGGGGTTG GCATGCCCGA ACTCAAATTC
CAGTATGCAG ATACAGCGAG CAACCGAACT ATTGCCCAGT TCCTGCAGGC TCAGCTAAAG
ACCAATTTAA ATCTTGATCT TACCCTTGAG CCTATGGAAC CGGCAGCCTT TAGTGCCTTT
GTGAACAGCG AACAGCATAC TTGGGCCTGG TTTGGCTGGG GTGCTGACTA TCCTGATCCG
GACAACTGGC TACCTGACCT GTTCGGAACC GGTGGTGGCA ACAACCATAC CGGATATTCA
AATCCCGCTT TTGATACGCT GGCCAGACAA GCCATGATGG AACTTGATAA TACTCTGCGC
CTTCAAATGT GGGCTCAGGC TCAGGAAATT GTTATGGCAG ATATGCCCAT TGTAACCATG
TTCTACCGTG AACGGTTCTA TGTTGTACAG CCGTATGTTA AAGGGCTGGA ACCAACCGGT
ATGGATGGCG GCATAATGGG TGATACTTCA TTGGTCAATG TCTCTATTGT GAAGTAG
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| Protein sequence | MKGKLLYLLA ALLIIVPIVF SGCTSDDNDD DGDDGTVTTP QVFRVNLAGE PNTIDPNKAS
WATERSVIML LFVGLLDFNS DLSLKAACAQ EIPTVANGGI SADGLTYTFK VKSNVTWSDG
SKVTAHDFEY SIKRMLDPDT AAEYASFYFD IVGAAAFNAA ASADAATKTA LRNAVGVTAV
DDTSLRITLN QTRPTFLSIM ALWPTSPVKE SVITAKGNLW TEAGNLIGNG PYTLKEWVHQ
DHMTFTLNTN YWDTKPTLTE IKYLMILDAT QELSAYKNGE LDMARVPVGT ETATLADPVY
GKQVVRNNDL TTFAFQFNVN KAPFDNLLVR EAMSCAIDRV AFVEQVRGGV GTPAYSWIPP
GMPGYDADLG KDFAFNVTKA KQLLADAGYP NGVGMPELKF QYADTASNRT IAQFLQAQLK
TNLNLDLTLE PMEPAAFSAF VNSEQHTWAW FGWGADYPDP DNWLPDLFGT GGGNNHTGYS
NPAFDTLARQ AMMELDNTLR LQMWAQAQEI VMADMPIVTM FYRERFYVVQ PYVKGLEPTG
MDGGIMGDTS LVNVSIVK
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