Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0927 |
Symbol | |
ID | 5131645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 913552 |
End bp | 913995 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529850 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001214385 |
Protein GI | 147669567 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000227736 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTATCC AGGATAGACC TAACAGACCA GCCAGGGGTG GGCGTGGCCG CTATACCCCG AAGCGCAAGA TATGTTCTTT CTGCGCTGAA AAGGTTAGCC GTATTGATTA CAAGGATTCG GCTAAACTGG CCAGATACAT ATCTGACCGT GGCAAAATAG AACCTCGCCG CCGCACCGGA ACCTGTGCCC GGCACCAGAG GGCTTTGGCT AATGCCATTA AGCGGGCTCG TTTTATTGCC TTGATGCCCT TTGTATCCGA ACATGTTCGC CGCCAAGGCA ATGTGGCTAC TTTTTCGCCT ATTCGTGAGC TTAGGCCTGA ACCCAAAATT GCCGAAGCCA AGATTGAGCC TAAAGTAGAA GTCAAGGCCG AAGTTGCGGT ACCCGAAGTA AAAGCAGAGG TTAAACCTGC GGCAGAGGCT TCTAAACCTG CTGAATCTGC ATAA
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Protein sequence | MSIQDRPNRP ARGGRGRYTP KRKICSFCAE KVSRIDYKDS AKLARYISDR GKIEPRRRTG TCARHQRALA NAIKRARFIA LMPFVSEHVR RQGNVATFSP IRELRPEPKI AEAKIEPKVE VKAEVAVPEV KAEVKPAAEA SKPAESA
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