Gene DehaBAV1_0921 details

Gene Information

• Locus tag: DehaBAV1_0921
• ID: 5131620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: -
• Start bp: 910095
• End bp: 910775
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640529846
• Product: single-stranded nucleic acid binding R3H domain-containing protein
• Protein accession: YP_001214381
• Protein GI: 147669563
• COG category: [R] General function prediction only
• COG ID: [COG1847] Predicted RNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000101944
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGG TCGAGACGAG CGCCAAGACA GTGGAGGAAG CTATAAAACT GGGTCTAAAT 
CAACTAAACG TAAGCCGAAA CGAAGTTGAG ATAGAGGTTC TGTCTGAAGG CCGGCATGGT 
TTGCTGGGTC TGCGCGGAGA AGATGCCCGT GTTTGCCTGC GGCTAATTGA ACCTGAATAC 
GAAGATGACA TAGCACCGGG TAACCAGATG GATGCAAGTG ATCTTGCTCA AAACATTCTG 
GAAACCCTGC TGGACAAGAT GGATATTGAG GCATATGTAG ATATTCTGCC TGAGAAAATG 
GTTACCGATG AGGAGTCACA GCCGAGTACT GTTTTGAATA TTGTAGGCGA AGACCTGGGT 
ATTCTTATTG GACGCAAGGG TCAAACCCTG ATAAGTTTGC AACAAGTGGT AAGGCTTATG 
ATTTCCCACC AGTTGGGGCG GTTTGAGCCG GTGGTGGTTG ACGTAAATGG TTATCGGCAG 
AGGCGCTTGA GCTCGCTTCA GACTTTGGCT TGGAGGACTG CCGAACAGGT CAAGCTGCGG 
CGGATGCCTT TTTCACTTGA GCCTATGCCT GCCTATGAAC GGCGGATTAT TCATCTGGCT 
TTGGCTGAAG ATGAAGAAGT AACTACCCAG AGCGTTGGCT TTGGTGAATC CAGAAAAGTT 
GTGGTAGTCT TAAAAGAATA G 

 

Protein sequence

MKKVETSAKT VEEAIKLGLN QLNVSRNEVE IEVLSEGRHG LLGLRGEDAR VCLRLIEPEY 
EDDIAPGNQM DASDLAQNIL ETLLDKMDIE AYVDILPEKM VTDEESQPST VLNIVGEDLG 
ILIGRKGQTL ISLQQVVRLM ISHQLGRFEP VVVDVNGYRQ RRLSSLQTLA WRTAEQVKLR 
RMPFSLEPMP AYERRIIHLA LAEDEEVTTQ SVGFGESRKV VVVLKE