| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0876 |
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| Symbol | nusA |
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| ID | 5131237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 865051 |
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| End bp | 866526 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640529794 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001214336 |
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| Protein GI | 147669518 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0313079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG ACTTTTTGCT CGCTATCACC CAGCTCTCGG CAGAAAAGAA TCTGCCAAAA
GAAGTAGTAC TTGCTACCGT TGAGTCGGCA TTGGTATCGG CTTATCGTAA AGAGAGCTTT
GCTCCAAACC AGAATATCAC GGTGAAGATT GACCAGCTTA CCGGCAAAGT AAAAGTCATG
GCCGAAAAGC AAGTAGTTGA AAAAGTGATA GATAGCCGCC AGGAAATGCG TTTGCTTGAG
GCTAAAAGGC TCAAAGCTGA TGCCAAGATA GGCGACTTGA TGATGGTTGA AGATACTCCG
GCTGATGCCG GGCGCATTGC CGCCCAGACA GCCAAACAGG TTATTCTCCA GCGTCTGCAT
GAGGCTGAAA ACACCGCTAT TTTTGATGAA TATGCCTCCA AGGCGGGAGA TACTCTGGTT
GGTGTGGTAC AGCGTATAGA ACCCAAACAA ATTACGGTGG ATATCGGCCG AGTAGAGGCT
ATAATGCCTG CTAATGAACA GGCCTATGGC GAAAGGTATC GTGCCGGACA GAGGATAAAG
GTTTACGTGG TGGACGTGGC AAAAACAGCC AAAGGGCCTT CAGTTATTGT CTCACGTTCT
CATCCCGGTC TGGTACGCCG TTTATTTGAA ATGGAAGTTC CTGAAGTTTT TAATCAGCTG
GTAGAGATAA AGGCTGTTGC CCGCGAGGCA GGCTCACGCT CTAAAGTGGC TGTAGGTGCC
CTTCAACCCG GAATTGACCC GGTGGGTTGT TGTGTGGGTT TACGTGGTAT TCGTATCCAG
AATATTGTCA GCGAGTTAAA CGGCGAAAAG ATAGATGTGG TTGCATGGAG TAGCGAAATA
GCTTCTTTTA TTGCCAATTC ACTCAGCCCT GCCCAGGTGA CCAAGGTTAT CCTGAATGAA
GCTGAAAGAT CTGCCATTGT GGTCATACCT GACCGCCAGC TTAGTTTAGG TATCGGTAAA
GAGGGTCAGA ATGTACGTCT GGCAGTTAAG TTGACTGGTT GGCGGATTGA CATAAAGAGT
GCTTCTGATG AAGATGTTGA ACGGGCCGAA GTGGCAGCCC GCCAGCAAGA AGAAATTTCA
AAGTCCAAAA TAACTGAAAA AGTTGTTGAA AAACAACCTG TAATAGCAGC TGTTTCAAAG
ACCGAAACCG TACCTGTTGA AAAGGTGTTA CCTGCCGATA CAATAATAGA ACCTGTGGCT
AAAGAAACAC CTGCGAAGGC TGAATCTGTG CCTGAAGAGC AGGGTGTGGT AGTGCCTTTG
AATGTGCTTG ATAAAGCGGC CGGGGGTGAT TCGGTCAAAC TGCGTTTTGC CGAAGACTTG
CTTCCCAGAC GTGAAGTTGT CATTGATGAT AAGAACAAAA GCAAGAACAA GAAAAAAACT
GTCAAAGGTA AAGATACCGC TGAAGATGGT ATCAAGCTTA AGGGCAAAAA ACGGCGGAAT
GTAACGGAAT ATGAATCAGA GGAAATTGAC TTCTAA
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| Protein sequence | MKSDFLLAIT QLSAEKNLPK EVVLATVESA LVSAYRKESF APNQNITVKI DQLTGKVKVM
AEKQVVEKVI DSRQEMRLLE AKRLKADAKI GDLMMVEDTP ADAGRIAAQT AKQVILQRLH
EAENTAIFDE YASKAGDTLV GVVQRIEPKQ ITVDIGRVEA IMPANEQAYG ERYRAGQRIK
VYVVDVAKTA KGPSVIVSRS HPGLVRRLFE MEVPEVFNQL VEIKAVAREA GSRSKVAVGA
LQPGIDPVGC CVGLRGIRIQ NIVSELNGEK IDVVAWSSEI ASFIANSLSP AQVTKVILNE
AERSAIVVIP DRQLSLGIGK EGQNVRLAVK LTGWRIDIKS ASDEDVERAE VAARQQEEIS
KSKITEKVVE KQPVIAAVSK TETVPVEKVL PADTIIEPVA KETPAKAESV PEEQGVVVPL
NVLDKAAGGD SVKLRFAEDL LPRREVVIDD KNKSKNKKKT VKGKDTAEDG IKLKGKKRRN
VTEYESEEID F
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