Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0858 |
Symbol | |
ID | 5132175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 847712 |
End bp | 850006 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529776 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001214318 |
Protein GI | 147669500 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00289553 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAAACTA CCGAGTTTTT GGCCTATATT GCATCTCTGC CTGATTATCA GGAGCAGATA GCCCACATTG AACGCTTGCC ATACCGCCCG GCGGAATATG CCAAACCAGA TGCCCCGCTT TTACCCCAGA TAGATGCCCG CCTTAGGAAA AAACGAATTT TGCCGTTATA TACCCACCAG GTAACCGCCG TAAATCTTTG CCGGCAGGGT AAAAACATAA TTGTGGCTAC CCCGGCGGCC AGCGGCAAAA GTTTGTGCTA TAACCTGCCG GTACTTGAAA AACTGGTATC GGACCCGAAT GCCAGAGCCC TATATCTTTA CCCTACAAAG GCTTTGGCAC AGGACCAGTT GCGAAGCCTG AAATCATTTG CGGTGCCATC ACTGCTTTTG GCTGAAGAGA TGGATGTGTA TGACGGTGAT ACCCCGAACC GTAACCGTTC GGATATCCGT TTGCAGGCAA GGATTATACT TTCCAACCCG GATATGCTTC ATGTGTCCAT ACTGCCGTCC CACCAGAAAT GGAGCCGTTT TTTACGCCAT CTGGAATATG TGGTTATAGA CGAAGCCCAC ATCTACCGTG GGGTATTTGG TTCGCATCTG GCAAATATCA TAAGGCGGCT TCGGCGTATT TGCAGTTACT ATGGCAGTTC ACCGAAGTTT ATTCTCAGTT CAGCTACTAT TGCCAGTCCC GGCACTCACG CCCAAAGTTT GACCGGACTG CCTTTTTCAG TGGTGGATAA TGACGGTGCT CCCAGAGCAG AAAAGGATTT TATTTTTTGG AATCCGCCTA TTATTGACCC TGCTAACGGG ATGCGTCATA GTGCCAACTC GGAGTCCGCG TTTCTTTTAA GTGAGTTGGT CAGCCACGAA ATCCGCACGC TGGATTTTGC TCGTACTAAA CGGCTTACCG AGCTTATTTA TAAATATTCG CGTGACCGCC TGATAGCCAT AAAACCCGAA TTTGCCGACC TTATCAAGCC ATATCGGGGA GGATATACTG CCGAAGACCG CCGCAAAATA GAAAAAGAAC TTTTCTCAGG TAAATTGCTG GGGGCGGTTT CCACCAATGC ACTGGAACTG GGGGTGGATA TCGGTGACCT TGGGGCTAGC ATACTGACCG GTTTTCCGGG CAGTATTTCC AGCACTTTCC AGCAGGCGGG GCGCAGCGGC AGAAGGTGCG GACACTCTCT TTCATTTTTG CTGGGGCTGG ATAATCCGCT TGACCAGTAC TATATGAATA ACCCTGAAAG GTTGTTTAAC AGCGGTTTTG AAAGTACTTT TATAAATCCT GAAAATCCGT ATATATATAA AGCCCACCTG TTATGTGCTG CTTGGGAAAT ATCCTTAAAT GAATCCGAAA CAGATATTTT CGGAGAAAAT CTGGCTGAAG AACTGGAAAT ACTCTCCGAA GAAAGAGTAC TTAACAAGCG GCGGGGCAAT TATTATATAT CAGCAGATAT TTCTTATCCT GCCAGAGATG TCAGTATCCG TTCAGCTTCG GGCAAGGATT TTTGCCTGGT AGATGCGCAG AGCGGACAGA TTATTGAAAC GCTGGACTAC CAAACAGCTT TTCTGCAGGC CTATCCGGGG GCAGTTTACC TGCATCAGGG TGAAAGCTAT CTGGTAAGCA GTTTTGACCT GAATTCACAG GTAGCCTTGC TGGAGAAGAA AAAACTGGAA TACTATACGG TTACCCATGA CCTTACCGAA ATAAGTATAC GTGAAGTGTT GAAAAACAAA TTGGTGGGGG ATATCAGTGT ATATCTGGGC AAAGTAGACG TTACTCTAAC GGTAACAGGT TACAGACGCA AAGCCCAGTT TACCGAGCAG ATATTGAGTG AAGAACAGCT GGATTTGCCG CCTCAAACCT TTCCCACTAT AGCGGTTTGG TTTAAACTGC CGGCTGAAAC AGTCCGTATT ATGGAAAAAT ATAAAATGGA TTTTCACGGG GCTATCCACG CTGCCGAACA TGCCCTTATT GGGCTTTTGC CTTTGTTTGC CTTGTGTGAC CGCAGTGATA TCGGGGGTGT TTCCACCCCC CGTCACCCGG ATACGGGTAC TTCGGCAATA TTCATCTATG ACGGGCATCC CGGCGGGGTG GGCATTGCCG AAAAAGGGTA CGAGATTATT GACCAGCTTT GGGAAACTGC CCGTAACCTT ATTGATAAAT GTACCTGCGT AGATGGCTGC CCCAGCTGTG TCCAGTCCCC CAAATGCGGA AATAACAATA AACCGCTGGA TAAAAACGGG GCAAAAACAG TGCTGGAAAG ATGCCTTGGC AAAACCTGTT TGTGA
|
Protein sequence | METTEFLAYI ASLPDYQEQI AHIERLPYRP AEYAKPDAPL LPQIDARLRK KRILPLYTHQ VTAVNLCRQG KNIIVATPAA SGKSLCYNLP VLEKLVSDPN ARALYLYPTK ALAQDQLRSL KSFAVPSLLL AEEMDVYDGD TPNRNRSDIR LQARIILSNP DMLHVSILPS HQKWSRFLRH LEYVVIDEAH IYRGVFGSHL ANIIRRLRRI CSYYGSSPKF ILSSATIASP GTHAQSLTGL PFSVVDNDGA PRAEKDFIFW NPPIIDPANG MRHSANSESA FLLSELVSHE IRTLDFARTK RLTELIYKYS RDRLIAIKPE FADLIKPYRG GYTAEDRRKI EKELFSGKLL GAVSTNALEL GVDIGDLGAS ILTGFPGSIS STFQQAGRSG RRCGHSLSFL LGLDNPLDQY YMNNPERLFN SGFESTFINP ENPYIYKAHL LCAAWEISLN ESETDIFGEN LAEELEILSE ERVLNKRRGN YYISADISYP ARDVSIRSAS GKDFCLVDAQ SGQIIETLDY QTAFLQAYPG AVYLHQGESY LVSSFDLNSQ VALLEKKKLE YYTVTHDLTE ISIREVLKNK LVGDISVYLG KVDVTLTVTG YRRKAQFTEQ ILSEEQLDLP PQTFPTIAVW FKLPAETVRI MEKYKMDFHG AIHAAEHALI GLLPLFALCD RSDIGGVSTP RHPDTGTSAI FIYDGHPGGV GIAEKGYEII DQLWETARNL IDKCTCVDGC PSCVQSPKCG NNNKPLDKNG AKTVLERCLG KTCL
|
| |