Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0829 |
Symbol | |
ID | 5131310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 815901 |
End bp | 816785 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529746 |
Product | inner-membrane translocator |
Protein accession | YP_001214290 |
Protein GI | 147669472 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATT TATTACAATA TATAATAACC GGCATTACAG TCGGTCTGGT ATACTCTCTG ATTGCTCTGG GTTTTACCCT TATCTGGAAA TCCTCATCGG TAGCCAATCT GGCACTGGGG CAGATGGTTC TTATATGCTC GTGGTTTACC TACAGTATGC TGGCACAGGT AGGCATGCCC CTTTGGCTGG GATTTATCTG TGTGGTTTTA TTTGCACTGG CTTTGGGCTG GCTGATGGAA AGAATTATCC TCAGACCGCT TATCGGCCAA CCTATTCTTT CATTGGTTAC AGTGACACTG GGGGTGGGAT TTTTCCTTGA GGGTGTAGTC AGTTTTGTCT GGCCGCAGAG CGTGGCAGCT ATGCCGAAAA TATTCCCCGA AACGCCTATC CATATCGGTT CAGCTGTTAT CTCGCAGGAA TATGTGTGGG CGGCCGGCAT ATCGTTACTG CTTTTTGCCC TGCTGACCAT CTTTTTTAAA TATCACAAAA TGGGTGTAGC CATGAGGGCT ACTGCTGATG ACCAACAGGC AGTTCAGGCC TGCGGCATAC CCGTAACCCG TATATTCTCA CTGTCATGGA TGCTGGCCAT AGTTTTGGCG GCGGTGGGCG GGGTATTAAT GTCCAGTATC GGCGGTATCA CTCTGGGGCT GGTGGAAACC GGTATCAAGG CCTTTTCAGT GGTGATACTG GGCGGGTTGG ATTCGTTTTT GGGGGCTATG ATAGCCGGGC CTATTATCGG TTTGGCTGAA AATCTGGGAG GCGGTTATCT CACTGCCCTT ACCTGGCCGG GTGTCAAGGA AGTGATACCC TTTATCATCA TTATCATAGT AATGTTCATC AAGCCGTATG GCCTGTTTGG GCAGGAACGC ATCGAGAGGA TATAG
|
Protein sequence | MADLLQYIIT GITVGLVYSL IALGFTLIWK SSSVANLALG QMVLICSWFT YSMLAQVGMP LWLGFICVVL FALALGWLME RIILRPLIGQ PILSLVTVTL GVGFFLEGVV SFVWPQSVAA MPKIFPETPI HIGSAVISQE YVWAAGISLL LFALLTIFFK YHKMGVAMRA TADDQQAVQA CGIPVTRIFS LSWMLAIVLA AVGGVLMSSI GGITLGLVET GIKAFSVVIL GGLDSFLGAM IAGPIIGLAE NLGGGYLTAL TWPGVKEVIP FIIIIIVMFI KPYGLFGQER IERI
|
| |