Gene DehaBAV1_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0819 
Symbol 
ID5131331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp806244 
End bp806900 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID640529736 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_001214280 
Protein GI147669462 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTG AAAACCCTGA AAAACAGGCA CTGGAAATAA TAAAGCGTCT TTCAGTAGTC 
TATCATGATG CTAAAACGGC ATTAAACTTT ACTACTCCAT TTGAGATGCT GGTAGCTACT 
ATTTTATCTG CCCAGTCTAC CGACAAGATG ATAAATAAAA TCACCCCGGC TCTGTTTAAA 
AAATATCCCG ACCCAAAGGC TTTTGCCGAG GCATCTCTAG CAGAACTGGA ACAAGATATA 
AAGTCTTCAG GATTCTTTCA CAACAAGGCC GCAAATATTA TAGGTGCTGC CAGAGGGGTT 
GTAAGCCGTT TTGGTGGGGT TGTACCCTCT GGCATGACTG ATATGCTTAC CCTGCCGGGA 
GTCGGGCGTA AAACGGCAAA TGTGGTGTTA CATAATGCTT TCGGGCTGGT GGAGGGGATT 
GCGGTAGATA CCCATGTTAA ACGCCTAACT GAACGGCTGG GTCTTACCAG CAATACTGAC 
CCGGTGAAAA TAGAGCAGGA TTTGATGGCT CTTCTCCCCC GTACATACTG GGGGGATTTT 
TCTTACTACC TGATTGACCA CGGGAGGGCG GTTTGTGATG CCAAAAAACC GCATTGTCCG 
GAGTGTGTTC TCAAGGATAT CTGCCCGTCT GCCTTTTTAT TTATCCAGGC GGAATAA
 
Protein sequence
MLVENPEKQA LEIIKRLSVV YHDAKTALNF TTPFEMLVAT ILSAQSTDKM INKITPALFK 
KYPDPKAFAE ASLAELEQDI KSSGFFHNKA ANIIGAARGV VSRFGGVVPS GMTDMLTLPG 
VGRKTANVVL HNAFGLVEGI AVDTHVKRLT ERLGLTSNTD PVKIEQDLMA LLPRTYWGDF 
SYYLIDHGRA VCDAKKPHCP ECVLKDICPS AFLFIQAE