| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0733 |
|---|
| Symbol | |
|---|
| ID | 5131231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 722341 |
|---|
| End bp | 723087 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529648 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001214195 |
|---|
| Protein GI | 147669377 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0344871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGAA ATGCTATCAG CTTGCGGGAT ATATCTTTCA ATTATAAACA CATCAAGGCC
TTAGATGACT TAAGTCTGGA GATTCCCGGT GGTATAAGCT TCGGAATAAT GGGTCCTAAC
GGGGCAGGCA AAACCACTCT TATCCGCATA ATGGTGGGGC TTCTCCGCCA AAAAAGCGGT
TACCTAGCCA TACTTGGAAA AGAGTTTAGC CGCCAACTGG AATACCAGCT GGGATACATG
CCACAGGCAC ACTCTCTGTA TACCGAATTG TCAATCAGCC AGAATATAGA TTTTTTTGCC
CGTGTCTACG GTCTGCGGGA TAAAACACTG CGAAAAGCCC GCATAGAAGA GGTAATCAGG
CTGGTAGACC TCTGGGAAAG ACGGAATGAT GCCGTTATGA ACCTTTCCGG TGGCATGAAA
CAGAGAGTAA GTTTGGCTTG TGCCATTGTC CATAATCCCC CGGTGATATT TTTAGATGAA
CCAACTGTGG GGCTTGACCC TGAACTGCGC TGCCGTTTTT GGGAATATTT TAAAAGCCTA
AACCAAAAAG GAGTAACCAT AATAATATCC AGCCATACGC TTGATGACGC TGCCCACTGT
GACCGTCTGG CGTTTCTGCG TGAGGGCAAG GTAATTGCGG AAGGTACTCC GGCGGATTTA
AAGGCGGCTA CAGGTAAAGC TGATGCCAGT CTGGAAGATG CCTTTTTACA TTCTATCCGA
ATAGGAGGTA TACCCTGCCA TGAATAA
|
|---|
| Protein sequence | MTGNAISLRD ISFNYKHIKA LDDLSLEIPG GISFGIMGPN GAGKTTLIRI MVGLLRQKSG
YLAILGKEFS RQLEYQLGYM PQAHSLYTEL SISQNIDFFA RVYGLRDKTL RKARIEEVIR
LVDLWERRND AVMNLSGGMK QRVSLACAIV HNPPVIFLDE PTVGLDPELR CRFWEYFKSL
NQKGVTIIIS SHTLDDAAHC DRLAFLREGK VIAEGTPADL KAATGKADAS LEDAFLHSIR
IGGIPCHE
|
|---|
| |