Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0714 |
Symbol | |
ID | 5131078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 703932 |
End bp | 705179 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640529625 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_001214176 |
Protein GI | 147669358 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATTC TCCACTTTGC AGATCTGCAC ATAGGGGTGG AGAATTATGG CCGTTTTGAC AGTGCAACCG GGCTTTCCTC CCGGTTGGCT GATTTTTTAA CTGCGTTTGA TCGTTTGGTA GCATATGCCA TTGATAAAAA AGTGGATCTG GTGGTTTTCA GCGGAGATGC TTACAAGAGC CGTGACCCCT CCCAGACCCA GCAACGGGAA TTTGCCCGCC GTGTAAGTAC TCTGGCAAGT AGCGGTATTC AGGTGTTTTT ACTGGTGGGC AACCATGACC AGCCTAATGC TGCCGGGCGG GCTACTACTA CCGAAATATT TGATACTCTG GATATTGCCA ATGTGCATGT TTCCGGCAAG GCCGAGGTGC GTTTGATAAA TACCCGAAAC GGACCTATTC AGATAGCTTC CCTGCCATGG TTACGCCGTT CATCTGTTCT TTCAGTATCA AACCAAAAGG AAGAAAAGAA CTTAAGCATT GAGGAACTGA ACCAGAGGGT GGAGAGCTAT CTGGCAGGTA TTATAGAAAA TCTGGCAGGC CAGCTTGATA AAAATATACC GTCCATTCTC TCTGCTCATC TTTCGGTCAA TACTGCCAAA GTAGGTTCAG AGCGGAATAT TTCCATAGGG CATGAACCTA CAGTTATGTT AAGCAATATT GCCAACCCTG CTTTTGATTA TGTTGCCTTG GGGCATATTC ATAAACAGCA GGTCTTGTCT TCTGCCCCTC CGGTTATTTA CCCCGGCAGT TTGGAAAGGC TGGATTTTGG TGAGGAAAAA GATGATAAGG GTTTTTATCT GGTTGAGATA GACCCGCTAA GCCATAAAAC TGATTTTGTG TTTATAAAGC TGGAAGGCCG CCGTTTTCTG ACTATAGAGC TGAATCTGAA CGCTGACAGT CTTGACCCCA CGCTGGAAGT AATAAATATA TTACAGGCAA GGCAACAAGA TATAAAAGAT GCCATAGTCC GCTTGAAACT GGAGTTGCCG GCGGAGATTG GCGGGCAACT GCGGGATAGC GATATAAGAG AAGCTCTTCG CGAAGCTCAC AATTTCACTA TCTCTAAAAA TGTTATAAGA TTAACTCGCC AGAGGGCAGA TGGCTTCAAG GTGGAAGGTC TGGATCCTAT TCAGGCCTTG GAACATTATC TGGAAATAAA GCAAACATCC GCACAGGAAA AGAAGACCCT GCTGGAATAT GGCCGCAGGC TCTACAGTAC ACTGGATAGC AAGCAGACAA AAATTTAA
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Protein sequence | MKILHFADLH IGVENYGRFD SATGLSSRLA DFLTAFDRLV AYAIDKKVDL VVFSGDAYKS RDPSQTQQRE FARRVSTLAS SGIQVFLLVG NHDQPNAAGR ATTTEIFDTL DIANVHVSGK AEVRLINTRN GPIQIASLPW LRRSSVLSVS NQKEEKNLSI EELNQRVESY LAGIIENLAG QLDKNIPSIL SAHLSVNTAK VGSERNISIG HEPTVMLSNI ANPAFDYVAL GHIHKQQVLS SAPPVIYPGS LERLDFGEEK DDKGFYLVEI DPLSHKTDFV FIKLEGRRFL TIELNLNADS LDPTLEVINI LQARQQDIKD AIVRLKLELP AEIGGQLRDS DIREALREAH NFTISKNVIR LTRQRADGFK VEGLDPIQAL EHYLEIKQTS AQEKKTLLEY GRRLYSTLDS KQTKI
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