Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0709 |
Symbol | |
ID | 5131488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 698601 |
End bp | 699254 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529620 |
Product | haloacid dehalogenase superfamily protein |
Protein accession | YP_001214171 |
Protein GI | 147669353 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2178] Predicted RNA-binding protein of the translin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA TCAGCGTCAA AATGGAACAA ATATCTGATA GCATACGGGA AAATTTCAAG ACCCGTGATG CCGCCCGTGA AAAATCTCTG CCTATCAGCC GGGAAGCTAT CCAATATTGC AGTCTGGCCA TTAGGGCGGT TCACCGGCAG GAACTGGCGC AGGCAAGGGA AATGCTGGTT TCAGCCAGAG CCCTTATCAA AGAGGCCGGG CAGGCCATAG ATGATTGCGG TGAACTGTCC AACACCACTT TTTTTCTGGA TGCCCAGAAA GAGTACGCTG AAGCTAATAC GGTACTGGCT CTGGTAAACG GGAAGGATAT GCCCTCGCCT GAGGAACTGG AAGTGGACAA TGCCGCATAT TTAAACGGCA TAGGTGAGGC GGCAGGTGAA CTGCGGCGTT ATATACTGGA CGGCCTGCGA AAGGGTGAAG ACACCCGCGG CGAAGAGCTT CTTCAGGCTA TGGACGATAT CTACGAAGTA CTGGTTACCA TGGACTTTCC GGATGCTATT ACCGGCGGGC TTCGCCGTAC TACTGACATG GTACGGGGAG TGCTGGAACG AACCAGAAGT GATCTTACTT TGTACATTCA GCAAAAGGGG CTTGAACAAA AACTGGAAGT ATTCCAGTCA AAACTGACCC GGAAAGGGGA ATAA
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Protein sequence | MTNISVKMEQ ISDSIRENFK TRDAAREKSL PISREAIQYC SLAIRAVHRQ ELAQAREMLV SARALIKEAG QAIDDCGELS NTTFFLDAQK EYAEANTVLA LVNGKDMPSP EELEVDNAAY LNGIGEAAGE LRRYILDGLR KGEDTRGEEL LQAMDDIYEV LVTMDFPDAI TGGLRRTTDM VRGVLERTRS DLTLYIQQKG LEQKLEVFQS KLTRKGE
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