| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0685 |
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| Symbol | |
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| ID | 5132006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 677937 |
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| End bp | 678599 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640529595 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001214147 |
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| Protein GI | 147669329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.268017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGAAA ATATTGCCCA AAACGTAAGA GATATTCTGG CGGAGCTACC GCCTGACGTA
GTGCTTGTGG CAGCTGTCAA AAAACGCCAA CCGGCTGAAA TATTAGCTGC TATAGCCGCT
GGGGTAAAAA TTATCGGGCA TAACTATCTC TCCGAGGCTG AAGAAACCTA TCCTTTTATC
GGTGATAAGG CCGAGTGGCA CTTTATCGGA AAACTCCAAT CAAATAAATG CAAAAAGATA
GTCCGACTGT TCTCAGTTGT GGAAACAGTG GATAGCTTTG AAATAGCATC TGAGCTAAAT
CGCAGAGCCG CCGAAATTGA TAAAGTTATG TCGGTTTTTA TAGAAATAAA CAGCGGCAGG
GAAAAACAGA AATCAGGGGT ATTGCCTGAA GAAACTGTAG AACTGGCAAA GCGGATATCC
GGCTTGTCTA ATCTTAAACT GGCTGGTTTG ATGACTATGG GGCCGGCACT GGAAGACCCT
GAGGAACTCC GCACTATATT CCGTCTTACC AAGATAAAAT TTGACGAAAT AGCTGTTATG
GGTTTGCCGA ACACCGAGCT TAAGTTTCTT TCCATGGGCA TGTCAGTCTC TTACAAAGTG
GCCGTTCAGG AAGGGACCAA TCTGGTTAGG TTGGGCACGC GTATCTTTGG CAACCGCCCC
TAG
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| Protein sequence | MYENIAQNVR DILAELPPDV VLVAAVKKRQ PAEILAAIAA GVKIIGHNYL SEAEETYPFI
GDKAEWHFIG KLQSNKCKKI VRLFSVVETV DSFEIASELN RRAAEIDKVM SVFIEINSGR
EKQKSGVLPE ETVELAKRIS GLSNLKLAGL MTMGPALEDP EELRTIFRLT KIKFDEIAVM
GLPNTELKFL SMGMSVSYKV AVQEGTNLVR LGTRIFGNRP
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