| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0669 |
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| Symbol | |
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| ID | 5131060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 658776 |
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| End bp | 659942 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529577 |
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| Product | LL-diaminopimelate aminotransferase |
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| Protein accession | YP_001214131 |
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| Protein GI | 147669313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000400869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAT CTAAACGGAT TGAGAATCTG CCGCCGTATC TTTTTGTCCA GATAAGCAAA
AAGATAGCTG AAAAACGCGC CAAAGGAGAG GACGTAATCA GTTTTGCCAT TGGCGATCCT
GATTTACCCA CCCCGAAACA CATCTTGGCG GAACTTTGCA AAGCGGCCGA AGATCCATCT
AACCACCGTT ACCCTGAAAC CGAGGGGCTG CCAGTACTAC GTAAAGCTAT GGCGGAATGG
TATCAAAAAC GTTTCGGAGT AAAACTAAAC CCGGACACCG AGGTTTTACC CTTGATAGGT
TCTAAAGAGG GTATAGGGCA CGCCGCCTGG TGTTTCCTTG ACCCCGGGGA TATTGCGCTG
GTGCCAAACC CTGCCTATCC GGTTTATGCC ATCAGCAGTC AACTGGCAGG CGCAGAGGTA
TTTAACCTGC CGCTAAACAA GGGGAATAAC TTCCTGCCTA ACCTGGAAGC CATACCGCAA
AATATCCTTT CAAAGGCCAA AGTTCTCTGG ATAAACTATC CCAACAATCC GACCGGAGCC
GTAGCTGGCC TAAGTTTTTT TCAAGAAGTA GCTAATTTTG CCGCCAAACA CAACTTGGCA
GTTTGCCATG ACGGACCTTA CTCTGAAATA GCTTTTGACG GCTACAAACC TGTCAGTTTC
CTTGAGGCTG ACGGTGCCAA AGATGTAGGG ATTGAGTTTC ATTCCCTCTC CAAGAGTTAT
AATATGACTG GCTGGCGGAT AGGCATGGCC GTTGGTAATG CCAAAATGAT AGATGCCTTG
AGACGTTTCA AATCCAACCT TGATTCAGGC ATACCTCAAG CTATCCAGCT GATGGCTATT
GCGGCTTTGA ACGGTTCACA AGAAATTATA AACCAGAATT GTGCCATATA TCAGCGCCGT
CGTGACCGCT TGGTAGAAGC ACTACGCAAT ATAGGTATGG AGGTTACAGC CCCCAAAGCC
AGTTTATACA TCTGGGCACC TGTACCTGAA AGCTATACCT CAGCCAGCTT TGCTACAGAA
CTGCTGGATA AAACCGGCGT AGTCGTCACC CCCGGTACAG GCTATGGGAC TGCCGGCGAA
GGCTATATAA GGTTATCGCT GACCGTACCT GATGAACAGA TTGAAAAGGG TATTGCCAAA
CTGGCTGGCT ATAAAAAATC GTCTTAG
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| Protein sequence | MKLSKRIENL PPYLFVQISK KIAEKRAKGE DVISFAIGDP DLPTPKHILA ELCKAAEDPS
NHRYPETEGL PVLRKAMAEW YQKRFGVKLN PDTEVLPLIG SKEGIGHAAW CFLDPGDIAL
VPNPAYPVYA ISSQLAGAEV FNLPLNKGNN FLPNLEAIPQ NILSKAKVLW INYPNNPTGA
VAGLSFFQEV ANFAAKHNLA VCHDGPYSEI AFDGYKPVSF LEADGAKDVG IEFHSLSKSY
NMTGWRIGMA VGNAKMIDAL RRFKSNLDSG IPQAIQLMAI AALNGSQEII NQNCAIYQRR
RDRLVEALRN IGMEVTAPKA SLYIWAPVPE SYTSASFATE LLDKTGVVVT PGTGYGTAGE
GYIRLSLTVP DEQIEKGIAK LAGYKKSS
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