Gene DehaBAV1_0661 details

Gene Information

• Locus tag: DehaBAV1_0661
• ID: 5131514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 649803
• End bp: 651674
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640529567
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_001214124
• Protein GI: 147669306
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; [COG3411] Ferredoxin

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.435318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATA TAGCGATTAA AAAGTTTAGC AGTGCAACCG AACTTGAAGC CAAAAGGCAG 
GAAATTCTTA AAAGCAGGAA TTCGGGGCAG GCGGTTATTG CTATTTGTTG CGGTACCGGT 
TGTCAGGCTT ACGGGGCTAA AAAAGTTGCA GATGCCTTTG AAGAAGAACT GGCTAAAGCC 
GGTTTGGGAG ATAAGGTTGA GGTAAGGACT ACCGGTTGCC ATGGTTTTTG TGAACGCGGT 
CCGCTGGTAG TTATCCGCCC CCAGAATATT TTCTACCAAC GTCTAAAAAT TTCAGATATA 
CCTGAAATCA TTGAAAAAAC CATAAAGAAT AACGAAGTAA TAGAACGATT GTTGTATGTT 
GATCCCATGA CCAAAGAGAA AAAGGTGCAT GAACATGATG TGCCTTTTTA CAAAAAACAG 
ATGCGTCTGG TTTTTGGCAA CAACGGCAAT ATAGACCCTA CCTCTATAGA GGACTATCTA 
GCGGTAGGCG GCTATAAATC TCTGGCCAAG GCTATATCCA GCCTGAAGCC TGATGAAATT 
GTGGAAGAAA TTATTAAATC CGGTCTGCGC GGTCGGGGTG GCGGCGGTTT TCCCACCGGC 
TGGAAATGGA AGTCCTGCAG GGAAGCCCAT GACCCGGTAA AGTATGTAAT CTGTAACTGT 
GACGAAGGTG ATCCGGGTGC ATTTATGGAT CGTTCCCTTA TGGAGGGCAA TCCCCATAGT 
GTTATAGAAG GCATGATTAT CGGTGCTTAT GCTATTGGCT CGCACGAGGC GTATATTTAC 
ATTCGTGATG AATATCCTAT GGCGGTTAAG CACGCCCTTC TGGCCATAAA ACAGGCCGAA 
GATTATGGTT TGCTGGGTGA AAATATACTG GGCAGCGGGT TTAGCCTGAA AATCCATATA 
AACAGAGGCG GCGGAGCTTT TGTTTGCGGT GAATCTACCG CCCTTATGGC CTCCCTTGAG 
GGTAAGGTTG GCGAACCCCG TGCCAAGTAT GTTCATACCT CTGAAAAGGG TCTATACGAC 
AAGCCTACCA CTCTTAATAA CGTAGAGACT TGGGCGAATA TACCCCTGAT TATAGAAAAA 
GGGGCAGACT GGTTTAACAA AATAGGCACT GCTGGCAGTA AGGGTACCAA GATATTCTCA 
CTGGTAGGCA AGGTCAACAA CACTGGGCTT ATTGAAGTTC CCATGGGGAT TACCCTTAGG 
GAAATTGTGT ATGATATTGG CGGTGGTATC CCCAAAGGCA AGAAATTCAA AGCTATTCAG 
ACTGGCGGCC CTTCCGGCGG CTGTTTGCCC GAAAGTATGC TGGATCTGCC GGTGGACTTT 
GATGAGCTTA CCAAGGCCGG CTCTATGATG GGTTCAGGTG CCATGATTGT TATGGATGAA 
GATAACTGCA TGGTGGAGAT TGCCCGTTAC TTCCTGAGCT TCCTTGAGGG TGAATCCTGC 
GGCAAATGTG TACCTTGCCG TGAGGGTGTC AAACGTATGC GCCAGATTCT AGAAAAGATA 
ACTAAAGGTG AGGGCGAAGA GGGAGACATA GAGCATCTGG AACAGCTTTC ACAGGCTATA 
CAAGACGCTT CTTTGTGCGC TCTGGGCGGC AGTGCTCCCA ATCCGGTTAT GTCCACCATA 
AAATACTTCC GTGAGGAGTA TGAAGCCCAT ATCCGGCAAA AGACCTGCCC CGCCAAGGAA 
TGCAAGGCTC TTATTACCTA TAACATTATT GATGCCAACT GTCCCGGCTG CGGTTTGTGC 
TATAAAGCCT GTGCAACAGG GGCTATTATT TCGCAGGGCA AAAAGATGTC GGTCATACTT 
GACCAAAGCA AATGTACTAA ATGCGGTGCG TGTTTTGACG CTTGTAAGCT ACACGCCGTA 
GAAATCAGAT AA 

 

Protein sequence

MSNIAIKKFS SATELEAKRQ EILKSRNSGQ AVIAICCGTG CQAYGAKKVA DAFEEELAKA 
GLGDKVEVRT TGCHGFCERG PLVVIRPQNI FYQRLKISDI PEIIEKTIKN NEVIERLLYV 
DPMTKEKKVH EHDVPFYKKQ MRLVFGNNGN IDPTSIEDYL AVGGYKSLAK AISSLKPDEI 
VEEIIKSGLR GRGGGGFPTG WKWKSCREAH DPVKYVICNC DEGDPGAFMD RSLMEGNPHS 
VIEGMIIGAY AIGSHEAYIY IRDEYPMAVK HALLAIKQAE DYGLLGENIL GSGFSLKIHI 
NRGGGAFVCG ESTALMASLE GKVGEPRAKY VHTSEKGLYD KPTTLNNVET WANIPLIIEK 
GADWFNKIGT AGSKGTKIFS LVGKVNNTGL IEVPMGITLR EIVYDIGGGI PKGKKFKAIQ 
TGGPSGGCLP ESMLDLPVDF DELTKAGSMM GSGAMIVMDE DNCMVEIARY FLSFLEGESC 
GKCVPCREGV KRMRQILEKI TKGEGEEGDI EHLEQLSQAI QDASLCALGG SAPNPVMSTI 
KYFREEYEAH IRQKTCPAKE CKALITYNII DANCPGCGLC YKACATGAII SQGKKMSVIL 
DQSKCTKCGA CFDACKLHAV EIR